Asparagus officinalis (garden asparagus): 109841926
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Entry
109841926 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109841926
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109841926
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
109841926
NCBI-ProteinID:
XP_020266439
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Position
5:63366596..63369230
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AA seq
282 aa
AA seq
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MENASSNGTKLLNMLSKWNPVGASLIDTSIENSTQRRSLAYLTYGTGNPIDDCWRCDPHX
HRKRKRLADCGIGFDHNALGGHNAVCYVVTDPNDDNPVTPKPGTLRHAVIQEEPLWIIFK
RDMVITLKQELIMNNFKTIDGQGVNVHIANGACITIQFVTNIIIHGVHIHDCNPTGNAMV
RRSPSHYRWRTMTDGDGVSIFGGSHVWVDHCSLSNCDDGLIDAIVGSTAITISNNYFTHH
NEVMLLGHSDSYERDKIMQVTIAFNHFREGLIQRMPRYKLKL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgcttcttcaaatgggacaaagttattaaatatgttatccaagtggaatcct
gttggtgcttctttgattgatacgagcatagaaaatagcacacaacgccgttccctcgct
tacctaacctacggaactggcaaccccatcgacgactgctggcgctgcgacccccactag
catcgcaaacgcaagcgcctcgcagactgcggcattggcttcgaccacaatgccctaggc
ggacacaacgcggtatgttacgtcgtgaccgaccccaacgatgacaaccctgtcactccc
aagcctgggaccctccgtcacgccgtcatccaggaggaacccctctggatcatcttcaag
cgcgacatggtcatcaccctcaagcaagagctcatcatgaacaacttcaagaccatcgac
ggccagggcgtcaacgtccacatcgccaacggagcttgcatcaccatccagtttgtgacc
aatatcatcattcatggggttcacattcatgactgcaatccgacgggcaacgcgatggtg
aggaggtcgccgtcacattacaggtggaggacgatgacggatggagacggggtttctatc
tttggggggagtcatgtttgggttgatcactgctcgctgtcgaactgtgatgatgggctc
attgatgctattgtggggtctactgccattaccatatctaacaattacttcactcatcac
aatgaggtgatgcttctgggtcacagtgattcttatgagagggacaagattatgcaggtc
acgattgccttcaatcattttagggaaggactcatccaaaggatgccaaggtataagctg
aagctatga
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