Asparagus officinalis (garden asparagus): 109842092
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Entry
109842092 CDS
T05243
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109842092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109842092
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109842092
U7-dependent histone pre-mRNA processing factors
109842092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
F07F6_N
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
109842092
NCBI-ProteinID:
XP_020266592
LinkDB
All DBs
Position
5
Genome browser
AA seq
204 aa
AA seq
DB search
MDQWLLVSDWMVFILFRNQNQSYKLVCDKETGKPKGYGFCEYPDEETALSGLRHLNGYEI
NGRQLRVNFAQKDKGSTDRKSCGALPNDPLTQYLATNLSIEQLNEVITSMEALLRQGDPL
ALQVQRECPQLANALYQVANFKQSSPSGFQNGINIQNPLILQQSSLPITSTSMNLVSQVM
KRSRSEISEDGNHPSKRPKLLLAQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtggcttttggttagcgattggatggtgttcatcctattcagaaaccagaac
caatcctataagttagtgtgtgacaaagaaactgggaaacccaaaggttatgggttttgt
gagtacccagatgaagaaactgctttgagtggtcttcgccatctcaacggttatgagata
aatggccgtcagctaagagttaactttgctcaaaaggataagggcagcactgatcgaaaa
agttgtggtgctctgccaaatgatcctttgactcagtatttggctactaatctgtcaatt
gagcaactgaatgaagtaatcaccagcatggaggctctgcttcgacaaggagatccactg
gctctgcaggttcagagagaatgcccacaattggcaaatgctctttatcaggtcgcgaat
tttaagcagtcatctccttcaggttttcaaaatggcataaatattcaaaaccccttgatc
ctccaacaatcgtcacttccaattacgtcaacttccatgaatttggtgtctcaagttatg
aaaagatctagaagtgaaatatcagaagatggtaaccatccttcaaagagaccgaagctg
ttactggctcagtga
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