Asparagus officinalis (garden asparagus): 109842270
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Entry
109842270 CDS
T05243
Name
(RefSeq) U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109842270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109842270
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109842270
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
109842270
NCBI-ProteinID:
XP_020266757
LinkDB
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Position
5:102268367..102283183
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AA seq
278 aa
AA seq
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MSDRRREKLRDRDHRDRDRDRERDRERDRSIARAQSRDRDRDRRPRPAPRKRSAHRPRQH
RSAHQKKLPPRRGVHRRHSHRRSHPTPPHRRKRPREESEEAKESREEGVPRVREAKDDGK
LLGMAAGATDVDAKRWQMMKMLGIPLGFDSTKGAGCLMPILLLHPPRPQPTRARRKRRRE
ESEEAKESKKKQGVPTDGAKAKDDGETVGDGAEPTDVDANEMEMMKMLGIPLGFDSTKGK
PVPDANVSGVRVVTKRQPRQYMNRRGGFNRPLPPERNR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcgaaggagagagaagctccgagaccgtgaccatcgcgatcgagatcgcgat
cgcgaacgagaccgagaacgcgaccgcagcatcgccagagcccagagccgtgaccgcgac
cgcgaccgccgaccgcgaccggcaccacgcaagcgctccgctcaccgaccgcgccaacac
cgctctgcgcaccagaaaaaactcccaccccgacgcggcgtccaccgccgccactcacac
cgccgctcccatccgaccccaccgcaccgccgcaagcgcccgcgagaggagagcgaggag
gcgaaggagtcaagagaagagggagtgccacgagtgcgcgaggcgaaggacgacgggaaa
ctgttggggatggcggcgggagccactgatgtcgatgcgaagagatggcagatgatgaag
atgcttgggatcccgctaggatttgattcgacgaagggggccggctgcctgatgcctata
ctcctcctccaccccccccgaccccaacccacccgcgcaagacgcaagcgccggcgagag
gagagcgaggaggcgaaggagtccaagaagaagcagggagtgcccaccgacggcgcgaag
gcgaaggacgacggggaaactgttggggatggggcggagcccactgatgtcgatgcgaat
gagatggagatgatgaagatgcttgggatcccgctagggtttgattcgacgaaggggaag
ccggtgcctgatgctaacgtgagcggggttagggttgtgaccaagaggcagccgaggcag
tacatgaatcggaggggtgggttcaatcggccgttgccaccggagaggaatcgctag
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