Asparagus officinalis (garden asparagus): 109842304
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Entry
109842304 CDS
T05243
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109842304
09124 Replication and repair
03420 Nucleotide excision repair
109842304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aof03051
]
109842304
03400 DNA repair and recombination proteins [BR:
aof03400
]
109842304
Proteasome [BR:
aof03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109842304
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109842304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
Motif
Other DBs
NCBI-GeneID:
109842304
NCBI-ProteinID:
XP_020266789
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All DBs
Position
5:complement(106067112..106074015)
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AA seq
353 aa
AA seq
DB search
MKLTVKTLKGTHFDLQVQPSDTVMAVKRNIEAIQGRGNYPWEKQLLIHSGKVLKDETTLE
ENQVSEDGFLVVMLSKNKTSATTGASSATQSKPVATGASSATQPAGTASSVPPTPSEVPT
QTPASENVVSGSSRGTEAPVYDEPASNLVPGNNLESMVHQLMDMGGGNWDKDTVQRALRA
AYNNPERAVEYLYSGIPTLGEAAQAEGPNTTGTAAEGDTLSGLPNSAPLDMFPQGAPIVG
GGASGGSLDFLRNNEQFQTLRAMVQANPQILQPMLQELSKQNPQLLRLIQEHHAEFLQLI
NEPVEGLEGDLSDQDMLEAMGFDRGHVIEAFLACDRNEELAANYLLEHAGDED
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgacagtgaagactctcaaagggacgcacttcgatctccaagttcagccgtcc
gatacagtgatggcagtgaagaggaacatcgaagcgattcagggcagaggtaattaccca
tgggagaagcagctgttgattcacagcggaaaagttctcaaggatgagacgacattggaa
gagaaccaagttagtgaagatgggtttcttgtcgtaatgctcagcaagaacaagacctca
gccacaactggagcctcatctgctactcagagcaagcctgtggccactggagcctcgtct
gcaacccagcctgcaggaactgcttcttctgtgcctcccactccaagtgaagttcccact
caaacaccggcctcagagaacgttgttagtggctctagtagaggaactgaggcccctgtt
tatgatgaacctgcatctaatttggtaccaggaaacaatctggaatcaatggttcatcag
ctgatggatatgggtggtggtaactgggacaaggatacggttcagcgagcacttcgtgct
gcttacaataatccagagcgtgctgtggaatacttatattctggaatccctacattagga
gaagctgctcaggctgaagggccaaacacaactgggacagctgctgaaggcgatactctg
tctggattgccaaattctgcacctctagatatgtttccacagggagctcccattgtgggt
ggaggtgctagtggtgggtctcttgatttccttagaaataatgaacagttccaaacattg
cgtgcaatggtccaagcaaatccacagattttacagccaatgcttcaagagcttagcaag
cagaatcctcaacttctaagattaatccaggagcatcatgcagagtttcttcagttaata
aatgaacctgttgaaggtcttgaaggcgatctgtcagatcaagatatgttggaagcaatg
ggctttgatcgtgggcatgtcatcgaggcatttttagcctgtgataggaatgaggagttg
gctgcaaattatttgttagaacatgctggtgatgaagactga
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