Asparagus officinalis (garden asparagus): 109842413
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Entry
109842413 CDS
T05243
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109842413
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aof01007
]
109842413
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109842413
Enzymes [BR:
aof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
109842413
Amino acid related enzymes [BR:
aof01007
]
Aminoacyl-tRNA synthetase
Class II (U)
109842413
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109842413
Prokaryotic type
109842413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
tRNA_synthFbeta
tRNA-synt_2
PheRS_DBD2
PheRS_DBD1
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
109842413
NCBI-ProteinID:
XP_020266881
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Position
5:14258517..14278915
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AA seq
499 aa
AA seq
DB search
MAAADSDDKTRAERSILGFLQSNEVISDSHQFASSVGIGHSELESVIKSLCGFQLIESQD
IKKERWLLTDEAKSYALNGSPEAQVFWAVPAEGISRAELEKKVGSQIFKIGSSQAIKNKW
VEIGKQLVSRKVDHVEDSVKDLLKNIEDGKMVDDKDIATLKKRKLITLQTWKGYSLKKGP
KYAPERKKVATDLTREHLLRGDWKDVEFKDYNLDVQEQPIEIGYLHPLLEVREAIQNIFL
QMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRELPEDYLEKVKQV
HEIGGYGSLGYRYRWKREEAEKNLLRTHTTAVSTRMLYLLAQKKPFTPKRYYSIDRVFRN
EAVDRTHLAEFHQIEGVICDRNLTLGHLIGVLNDFFASLGMKKLRFKPAYNPYTEPSMEI
FSYHEGLDKWVEVGNSGMFRPEMLRTMGFPEDVSVIAWGLSLERPTMILYGINNIRDLFG
PKVDFNLIKSSKICRLGWQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagattcagacgacaaaacgagggccgagagatcgatcctaggttttcta
cagtccaacgaagtgatatcagactctcatcagttcgcttccagcgtcggaatcggccac
agcgagctcgagagcgtcatcaagagcctctgcggattccaactgatcgaatctcaggat
ataaagaaggagcgatggttgttgactgatgaagcgaagtcgtacgctttgaatggatcg
ccggaggctcaggtgttttgggcagtgcctgctgaggggatatcaagagccgaactcgag
aaaaaagtaggcagtcagatttttaagatcggttcatcacaagctattaaaaacaaatgg
gtggagatcgggaaacaattggtctcgagaaaggtggatcatgtcgaagatagcgtcaaa
gatttgctaaaaaatattgaggatggaaagatggtcgatgacaaggacattgctacactg
aaaaagaggaagctcattacccttcagacatggaagggttactctctgaaaaaaggccct
aaatatgcaccagagagaaagaaggttgcaactgatctaactcgggaacatctactgagg
ggtgactggaaggatgtagagttcaaagactacaacctagatgttcaagaacaaccaatt
gaaataggctacctgcatcctctgcttgaggtgcgagaagcaatccagaatatctttctt
cagatgggttttgaggagatgccaacaaacaattttgttgagagcagtttctggaacttt
gatgcactattccaacctcaacagcaccctgctcgtgattcacatgatactttctttctt
aaagttccttctaccacacgagaattacctgaagattacctggagaaagtaaaacaagtc
catgagattggtggttatggatccctgggatataggtatagatggaaaagggaagaagca
gagaaaaatctcctccgaactcacacgaccgcagtttccacaagaatgctttacctactt
gctcagaagaagccttttactcccaagagatactactctatagatcgtgttttcaggaac
gaggctgttgaccgaactcatctggcagagtttcatcagatagaaggtgtcatatgtgat
cggaatctcacacttggtcatctgattggagtgttgaatgatttctttgcttcccttggc
atgaaaaagctgcggttcaagcccgcttataatccatacactgaaccaagcatggaaatc
ttcagttatcatgaaggtttggacaagtgggtggaggttggcaattctggcatgtttagg
cctgaaatgttgcgcaccatggggttcccggaggatgtttctgttattgcatggggtctt
tcgctagagaggccaacaatgattctatacgggattaacaacatcagggacctctttgga
ccgaaggtggatttcaatcttatcaaaagcagcaagatctgccgtttaggttggcagtaa
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