KEGG   Asparagus officinalis (garden asparagus): 109842414
Entry
109842414         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein SDE2 homolog
  KO
K25059  replication stress response regulator SDE2
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109842414
   03032 DNA replication proteins [BR:aof03032]
    109842414
   03400 DNA repair and recombination proteins [BR:aof03400]
    109842414
Spliceosome [BR:aof03041]
 Complex C
  Other components
   Complex C specific factors
    109842414
DNA replication proteins [BR:aof03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    109842414
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109842414
SSDB
Motif
Pfam: SDE2 SDE2_2C SAP
Other DBs
NCBI-GeneID: 109842414
NCBI-ProteinID: XP_020266883
LinkDB
Position
5:complement(113691880..113696805)
AA seq 384 aa
MAIYQILVKLLDGHTRCLQFASPTLTGETLKQVLALPANLRLVTGTLDLADETLITVASP
SNLFPSLTVLPRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKXAA
GVXXXXXXSFALYRDGKRKVLPAAGGSVSKRMKIWMGKKKVDESDSDVDEDDDEDEDDKE
KSVVLDDGSCMSHDKEEEGTSAAGLVSASSDGESSGRLSEQSNLDEVIGVSGSEQSSGGA
SENCNLGEVNGKCDFETPAVELGSVTGDSSTEADVLAKSEMGVSEEAAAQNSPASILEEV
TVMKEVKPAETPVGPEIIDKETVIQTSDRYNSEEPLKFDEYNSAVELEILGMERLKAELQ
SRGLKCGGTLQEPKKVLAAKTEGK
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcgatctatcaaatcctcgtcaagctcctcgacggccacacgcgatgcctccaattc
gcctctccaacgcttaccggcgaaaccctaaagcaagtcctcgccctccccgccaaccta
cgcctcgtcaccggaaccctagatctcgccgacgaaaccctaatcaccgtcgcctctccc
tccaacctgttcccctctctcaccgtcctcccccgcctccgcggtggaaagggcgggttc
ggctccctcctccgaggcgccgccacgaaggctggtcagaagaagaccaacaacttcgac
gcgtgtcgagatatgagtggtcggaggttgaggcatgtgaacgctgagaagnaagctgca
ggagtggnnnnnnnnnnnnnnnagtcgtttgcgctgtatcgggacgggaagaggaaggtt
ctgccggccgctggagggtcggtctcgaagaggatgaagatatggatgggaaagaaaaag
gttgatgaaagtgacagcgacgtagatgaagacgacgacgaagatgaagatgacaaagag
aaatcagttgtgcttgatgatggaagttgtatgagccatgataaggaagaagaggggact
tctgctgctggtctggtcagtgctagttcagacggggaatcatcaggaaggctttctgag
caaagcaatttggatgaagtcattggagtgtcaggtagtgaacagtcatctggtggagct
tcagaaaattgcaacttgggtgaagtaaatgggaaatgtgattttgagactcctgcagtg
gaactgggttctgtaactggagacagtagcacagaggcagatgttttagcaaaatctgag
atgggagtatctgaggaagctgctgcacagaatagtccggcttctatattggaagaggtc
acagtaatgaaagaggtcaagccagcagaaacgccagttggtcctgaaattattgataaa
gaaacagtaattcagacttctgatagatacaattcggaggagccattgaaatttgatgag
tataattctgcagtggaactggagatccttggcatggaaaggttaaaagcagagctgcag
tcacgaggattgaagtgtggtggaacgttgcaggagcccaagaaagttctagccgccaag
actgaaggaaaatga

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