Asparagus officinalis (garden asparagus): 109842448
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Entry
109842448 CDS
T05243
Name
(RefSeq) E3 SUMO-protein ligase MMS21
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109842448
03400 DNA repair and recombination proteins [BR:
aof03400
]
109842448
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109842448
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109842448
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
Zn_ribbon_8
zf-RING_2
zf-C3HC4_2
Zf_2nd_IFT121
RNaseH_pPIWI_RE
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
109842448
NCBI-ProteinID:
XP_020266914
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Position
5:116933256..116939893
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AA seq
281 aa
AA seq
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MVAAGFTTEDGVDEVEGSQRWQRYWRFLARLHRERERESPTGNSRISTASSALYSDNQSL
IAEIRKSINIFKTIAVDLEKNEKTDKVKQLEEGVLELLETYDDCARFSDAIKSMGESYQP
SDEPTDFRKVLEDEVAKLKAASPSVPASNPLYRNFKEAVWSVHHAGQPMPGEEQEDIIMT
STQNNILNIMCPITGKPVIELQDPVRCMDCKHIYEKGAIMQYIRKKKPQPTCPIGGCPRI
LQAARIVCDPELLVEIEEMRATYNTEVHATAVEDFTVIDDE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcagggtttacgactgaggatggagtcgatgaggttgaggggagtcaaagg
tggcagcggtattggaggttcctagcaaggctccacagagagagagagagagagagcccc
accggcaattcaagaatctccaccgcctcctccgccctctactccgacaaccagtcccta
atcgccgagattagaaaatccatcaacatattcaagaccatcgccgtcgatctcgagaag
aacgagaagaccgacaaagtgaagcagttggaagagggcgttcttgagctcctggagacc
tacgatgattgcgctcgattctctgacgcgatcaaatcgatgggagaatcttatcaacct
tctgacgagcctactgattttaggaaggtgttggaggacgaggtggcgaagctgaaggcg
gcatcgccttctgttccggctagcaatcccttgtaccggaatttcaaagaagctgtttgg
agtgttcatcatgcaggtcaacccatgcccggagaggaacaggaagatataataatgact
agtacacaaaacaatatcttaaacatcatgtgcccaataactggaaagccagtcatcgaa
ctccaagatccagttcgctgcatggattgcaaacatatttatgagaaaggtgcaattatg
cagtatataagaaagaaaaagccgcagccaacatgccctattggaggctgccccagaatt
ttgcaagcagcaagaattgtctgtgatcccgaactacttgttgaaatagaggagatgcgt
gcaacgtataacactgaggtgcatgccactgcagtagaggatttcactgtaattgatgat
gaatga
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