Asparagus officinalis (garden asparagus): 109842736
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Entry
109842736 CDS
T05243
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109842736
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109842736
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF1367
HVO_0758
DUF4062
Motif
Other DBs
NCBI-GeneID:
109842736
NCBI-ProteinID:
XP_020267197
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All DBs
Position
5:14399015..14403002
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AA seq
353 aa
AA seq
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MEKELLETFEAAKKARTRLAEAGGSPEADRCVDALKRLRKMPVTMGILVKTQVGKRLRAL
AKHPQKKIQAVASDLLNFWKNIVIEETAKGDKKSGSSQSSSQSDAKSERTEPLKGEKMSR
SESITSRSQSVQVNKVGSSNGLKAERITKTETKKPERSGSDHACFPKLSSVVKCNDTLRD
KLREILAEAFSRVYKETSESERDEVKNILDEVDACDPFRVAVTVESAMYEKFGSSNGSHK
MKYRSIMFNLKDSKNPDFRRRVLLGHVKPERIVDMTPEEMASDERKLANKQIKEKALFDC
ERGQAPKATTDQFKCGRCGQRKCTYYQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctgttggagacgttcgaggcggcgaagaaggcgcggacgcgtttggcg
gaggccggaggatcgccggaggcggatcggtgcgttgacgcgctcaagaggctgagaaag
atgccggtcaccatgggcattctcgtcaaaacgcaggttggtaaacgtcttcgagctctt
gccaagcatccacagaagaagattcaggcagttgcttctgacttactgaatttttggaaa
aatattgtcattgaggaaacagcaaaaggggacaagaaaagtggtagctcccaaagttct
tcgcagtctgatgctaaatctgagaggacagagcctctcaagggagagaagatgtcaaga
tccgaatccataacatcaagatctcagagtgtgcaggtcaataaagttggttccagcaac
ggactaaaggccgagaggattaccaaaacagaaactaaaaaacccgaaaggagtggatcg
gaccatgcttgctttccgaagttgtcatccgtagttaaatgcaatgacacattgagagat
aaacttcgtgaaattcttgctgaggccttttctagagtttataaggagaccagtgagagt
gagagagatgaagtgaagaacatcttggatgaagtagatgcttgtgacccatttcgtgta
gctgtaactgtggaatctgctatgtacgaaaaatttggttcttcaaatgggtctcacaag
atgaagtatagatcaataatgttcaatctaaaggacagcaagaacccagatttcagaaga
agagttcttcttgggcatgtgaaaccggagagaatagttgatatgacacctgaagagatg
gcaagtgatgagagaaaacttgcaaataaacagattaaagagaaggcattatttgactgt
gagagaggacaagctcctaaggctactactgatcagttcaaatgtggtcgttgtgggcag
cgaaaatgcacttattatcagttgcagactcggtcagctgatgaaccgatgacaactttt
gtgacttgtgtaaactgcaacaaccattggaagttctgttag
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