Asparagus officinalis (garden asparagus): 109842758
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Entry
109842758 CDS
T05243
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aof03036
]
109842758
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
109842758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR55
Ctf4_C
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RIG_2nd
eIF2A
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_ELP1_1st
Beta-prop_VPS8
Beta-prop_SPT8
DUF7099
Motif
Other DBs
NCBI-GeneID:
109842758
NCBI-ProteinID:
XP_020267226
LinkDB
All DBs
Position
5:31217942..31224447
Genome browser
AA seq
997 aa
AA seq
DB search
MKGRSLKLREAHKTNGIASVCSILWSGDGHRLITRRRVRSVHLIHDQSQPSKAATSLRYH
KDGVTALALSPNSTSLASGSIDHSVKLYTFPDGEFQSNVTRFTLPIRCLAFNKSGSLLAA
AGDDDGIKLIATVDSSISRVLKGHKGSVTCLAFDPKNQYLASVDGFGTVIFWELSSGRQI
HTLRGVAPNCEADDSLLNLLSWSPDGETLAVPGLRNEVVMYDRDTAEKLFTLKGDHEKTV
CFLSWSPNGKYMATSGLDKQVLIWDIDQRQDIDRQKFDDRICCLAWKPNGNSLAVIDTMG
KFSLWESPVPTCMKSPTDGTPSLNENGFILFDDDEDDHDAHKSDSLDDDIEDGHGESFLS
SRKRFRKQSHLDENTDDNSDGEEGLLRQIESRKRSSTKRKENVGIGTEHCVTSRNSSSSK
MQDAFQSGATPVQAGKRRFLAYNMLGSITTIENETYSHIEVDFHDTGRGPRVPSMTDHFG
FTMASLNENGSIFANPCKGEKNMSTLMYRPFGSWASNSEWSMRFEAEEVKAVALGTGWVA
AVTNLNFLRIFTEGGLQRHIISLNGPVVTAAGYKDEVAVVTHVSDCLPSGDQVLEVKVFN
ISERTQTITSRLPLTPNACLSWFGFSEEGQLSAYDSKGVLRVFGNLYGGTWLPIFSASKA
KKSEDENYWVVGLNASKLFCIVCNFPESYPTVGLYSSLHLLNFHFPLASSDLGADELENE
FIIRNLQLSQAQKKIEEVAASGLDTTILEDETFNMEASIDRCILRLIASCCNADKLVRAI
ELARLLTLKKSLMGAIKLATTLKLPLLAERFNGILEERLSNECREANITNTQLLKSSPAS
EIKRTAEPSTTLPLASSSHSHFSKHGKLEQSTISGVIEPCKNMKGGVSKVGAQTAADPFA
KAPSNQEKAEINAKKDSKHRNAASENSKEQVNHKFQKVTTEGVSDIGSNEKQCIRPTNPF
AKSSNNQDKSSLFDSIKKMRKADIEKNEKVSSKKAKA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcgatcactgaagcttcgagaagctcacaagaccaacggcatcgcctcggtc
tgctcgatcctttggtccggcgacggccaccgcctgatcacccgccgccgcgtccgatcc
gtccatctcatccacgatcaatcgcagccgtcgaaggccgccacctccctccgctatcac
aaggatggggtcaccgccctcgctcttagccctaattctacttctctcgcttctggatcc
atcgatcactctgtcaagctctacacttttccagatggagagtttcagagcaatgtaaca
agattcactttgccgatacgatgccttgcctttaataaatctggtagcttattagctgct
gctggtgacgatgatggcatcaagttgattgctacagtagatagttcaatctctagggtc
ctcaagggccataaagggtctgtaacttgtctagctttcgatccaaaaaaccagtattta
gcatccgttgatggtttcggcactgtaatattttgggaactctcaagtggaagacaaatt
cataccttgagaggtgtagccccaaattgtgaagcagatgactccctcctaaatcttctt
agttggagccctgatggagaaactctggctgttcctggtttgagaaatgaggtggtgatg
tacgatagagacacagccgagaagttgtttacactgaagggagatcatgagaaaactgta
tgttttctttcttggtcgcccaatgggaagtatatggctacttctggtctagataaacaa
gttttgatctgggatattgatcagaggcaggatattgacagacagaagtttgatgatagg
atatgttgcttagcttggaaaccaaatgggaattctttggcggttattgataccatgggc
aaatttagtttgtgggagtctccagttccgacgtgtatgaaatctcctacagatggtacc
cctagcctgaatgagaatggatttatcttatttgatgatgatgaagatgatcatgatgct
cataagtctgacagtttggatgatgatatagaagatggtcatggtgaatcttttctgagt
agccggaaaagatttaggaagcagtcccatttagatgaaaacactgatgataatagtgat
ggagaagagggattacttcgtcagattgaatcacgtaaaagaagctctactaagcgaaag
gagaatgttggcattggaacagaacactgtgtcacttcaaggaactcttcaagttcaaaa
atgcaggatgctttccaatcgggtgcaactcctgtgcaggctgggaaacggcgatttctt
gcctacaatatgcttggaagtataacaacaattgaaaacgagacatattcccatatagag
gttgattttcatgatactgggagaggtcctagggttccctcaatgactgatcattttggc
ttcacgatggcttctctaaatgaaaatgggagcatctttgcaaatccatgcaagggagaa
aagaacatgagtactctgatgtatcggcctttcggtagttgggctagtaatagtgagtgg
tcaatgcggtttgaagcagaggaagtgaaggctgtagcccttggtactggttgggtggct
gcagttacaaatcttaattttcttcgcatcttcacggagggtgggttgcagaggcatatt
atctctcttaatggtccagtggtaacagcagcaggatacaaggacgaagtggctgttgtt
actcatgtttcagactgtcttccatcaggagatcaggttctagaagttaaagtgtttaac
atctctgaaagaactcagaccatcacatctcgtcttcctttgactcccaatgcttgttta
tcatggtttggctttagtgaagagggacagttaagtgcgtacgactccaagggggtactc
agagtgttcggtaacctatatggaggcacttggcttccaatcttcagtgctagcaaagca
aagaagtctgaagacgaaaactattgggtagtcggtttaaacgcaagcaagctgttctgt
attgtgtgcaattttcctgaaagttacccaacagtaggactatactcttctctgcacctg
ttgaattttcattttcctcttgcctcttctgatcttggtgctgatgaacttgaaaatgag
ttcataatcaggaacctgcaactctcacaggctcagaagaaaattgaagaggtggcagcc
tctgggctggacacaactatacttgaggacgagaccttcaacatggaagcttctatagac
cgatgcatcttgaggcttattgccagttgttgcaatgctgataagcttgtgagggcgatt
gaactagcaaggctgctaactttgaagaaatcactgatgggtgcaataaagcttgctaca
acgttgaagcttcccctacttgcagagagattcaatggaatactggaggagagattgtca
aatgaatgtagagaggctaatatcacaaacacgcaactcctaaaatcttcacctgcatct
gaaatcaaaagaactgcagagccgtcaacaacattacccttggcatcttcgtctcattct
cacttttccaagcatggaaaattggaacagagtactatatccggagtgattgaaccctgc
aagaacatgaaagggggagtttcaaaagtgggagctcaaacggcagcggatccatttgcg
aaggcaccaagtaaccaagagaaagcagaaatcaatgcaaaaaaggatagcaaacatcgc
aatgctgctagtgaaaattcaaaagaacaagtcaatcataaatttcaaaaagttacaact
gaaggggtttctgatattggaagcaacgagaaacaatgtattcgacctacaaatccattt
gcaaagtcatcaaacaaccaggataaatcttctctttttgattccatcaagaaaatgagg
aaagcagacattgagaagaatgagaaggttagcagcaagaaggccaaggcttag
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integrated database retrieval system
