Asparagus officinalis (garden asparagus): 109842780
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Entry
109842780 CDS
T05243
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109842780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109842780
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
109842780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
109842780
NCBI-ProteinID:
XP_020267251
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Position
5
Genome browser
AA seq
1193 aa
AA seq
DB search
MRKVEIQDLPALVYQLLVLASRGVSRREIVKGILGFFEGLKGQGRIVREVEGTVLMHVNF
AVKQDLSLGNEVIGIVKSDFGVINHFVVAVVLSIARVRRFGENAIGVLKAAVVSSQKDYR
VSRDCKWLPDKVKEECLETAKYVEKAFIKAINESNCGREHVVPSIVQFCFILLESANEES
GKVSDGAEELMGIEELGIKLLKTLFEIHDMARNEIIEQCKFRILSLKPQQSIPIINFPYS
MAEFVPRMKELLDYFTFMHDETSIRLVKAVLPLIKFSRNLQDYIVLVVRKAMFRREDTIR
TAATITIIDLIFVENKSRKSGPDSLQDSSSQASCSQQTDVPCGTRGSLFQELSGLLRRCL
SQKARVKEVMYYGLMKLVVLDPFIAGSIFDLLLPHFLNFYSEDTKFLLRLDACFTLENGK
VSFLEPLDCLLSCVSWILLLQPHGKSDNPLEHSWQCFDFSISQDNEEGRASSGEQFSNAL
SKIRKSLISCRLEDGPGQSQDPDSHSSDGEKAYLRAWILLGVIEVFVNIVASELEKATEK
VNLEKEIIELVESYCLIEKKVELNRQVSGRKGPSRATAQDIPTASNSEPRECSRASLSKL
SQTRRSFFATSSIHQLLVVAANLYAAAVSDVASQNHSQSSFSKRLDQSLKLISFSLKACL
RHLKSISVMERGESGNVLNVLIYGDVKHLAQPIMRLIWLLMSGPKLEKDPKNKESKGKKN
VGSKRDQSVLSLLCLNELFKLNSSQTHLTEIVEELNSMSASDWNLEGGTNAAEGNPQEQD
LLENDPFVRSMHLFLEKKIKPLYARYISSTGFQESEVLSELMVTLGKKLAHEQRKLYGNW
AVGICRSHKVENHSAARSLVSLALNLLPASDDLVIAREMASELLKVIGSEDKDPTAMSET
FLVINHSTKNVIATVMMQLVEFSIVDLDWAVSRLKAVSTFRHEFAKPNGNIQFGERLPGM
LLEEAIYSRSEALVDVMSSFTEMNLKDSLAEQLLKLSARFYKLLARMTKLRIAPKGCRQF
LPGLKFQKLAEVTCKKLTSPLYNFMALVQTNQQDNTQHKGIINKIKRENRCIPDLIYQIE
DYERYLIQLSKLTKVNLLRNAKRSTARDFKIIETKKMDTPEQEPSHSGDESDQESDGLGE
DKEPEKVATYPESDGEGADAAEDTESEKDEQEIVVPKKRVKLSKVIQDSDEEG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggttgagatccaggatttgccggcgttggtgtaccagttgctggttttggcg
tcgaggggggtgagcaggagggagatcgtgaaggggatcttagggtttttcgagggtttg
aaggggcaggggaggattgtgagggaggtggaggggacggtgctgatgcatgtgaacttc
gcggtgaagcaggatttgtcgctggggaacgaggtgattgggatcgtgaagtcggatttt
ggggtgattaatcattttgtggttgctgtggttctttccatcgcgagggttaggaggttt
ggggagaatgcgattggggttttgaaggcggcggttgttagttcgcagaaggattatagg
gtttcaagggattgcaaatggttgccggataaagtgaaggaagaatgtcttgaaacagcc
aaatatgtggagaaggctttcattaaagctattaatgagagcaactgtggtagagagcat
gtagtacctagcattgtccagttctgctttatcttgctagagtcagcgaatgaggagagt
ggtaaagtcagtgatggagctgaagaactgatgggtattgaagaacttgggattaagttg
ctcaagactctttttgagattcatgacatggcaagaaatgagataattgagcaatgcaag
tttcggattctttctctgaagcctcagcaaagtattcccattataaattttccatattca
atggcagaatttgttcctcgcatgaaagaattattggattatttcactttcatgcatgat
gaaacttccattcgtctcgtcaaagctgttctgccactgattaagtttagccggaacctt
caggattacattgtattggttgtccgaaaggctatgttcagaagggaagatactatccgt
acagctgctactattaccataattgatcttatatttgtggaaaataaatccaggaaaagt
ggcccagattctttacaagattcttcaagccaagctagttgcagccaacaaactgacgta
ccctgtgggacgaggggaagtctctttcaagaactgagtggcttgctccgtagatgtctc
tcacagaaggctagagttaaagaagtcatgtattacggtcttatgaagcttgttgtttta
gacccttttattgctggttcaatctttgatcttctcttgcctcacttccttaacttttat
agtgaggataccaaatttctcctcagacttgatgcttgctttacgctggagaatggaaaa
gtgagctttctggaacctctagactgtcttttgtcctgtgtctcttggattcttctcctt
cagccccatggcaaatctgacaatccattggaacattcttggcaatgctttgatttctct
atttcacaagataatgaggaaggaagggcgtcatctggtgagcagttttcaaatgcttta
tcaaagatccgaaagagtttgatcagctgtagattagaagatggtccaggacagagccaa
gatcctgattctcactcatcggatggagaaaaggcctatttacgagcctggattttgctt
ggagtgatagaagtctttgtcaatattgttgcttcagagttggagaaagcaacagaaaag
gttaatcttgagaaagaaattatagagcttgttgaatcatattgtcttattgaaaagaag
gtagagttgaatagacaagttagtggcaggaaagggccttcaagagctactgcacaagat
atcccaactgcaagtaatagcgagccaagagaatgttctcgtgcctctctttcaaaacta
tcacaaacaaggagatctttctttgcaacctcaagtattcatcagttattagtggttgct
gcgaatttgtacgctgctgccgttagtgacgtagcttctcagaatcactctcaatcatct
tttagcaagagattagaccagagcctgaagctaatatcattttctttgaaggcttgcctt
cgtcatttaaaatcaatttctgtgatggaacgtggagaaagtggcaacgttttgaatgtt
ttaatttatggggatgtcaaacacctggcacaacctataatgcgtcttatttggttgctc
atgtcaggtccaaaattggaaaaggatccaaagaataaggaatccaaagggaagaaaaat
gtaggaagtaaacgggatcaatccgttctgtcgttgttgtgtctaaatgaattgtttaag
ttgaattcttctcaaacgcaccttacagaaatagtcgaggagttgaactctatgtccgca
tcagattggaatctagaaggtggaactaatgctgctgagggcaaccctcaagaacaagac
ttgttagaaaatgacccatttgtgagaagtatgcacttgttcttggagaagaaaataaag
ccactatatgctagatacatttcctctactggtttccaggaatctgaggttctatctgag
ttaatggtgacacttggaaagaaattagcacatgaacaaagaaaactttacgggaactgg
gcggtgggcatatgtaggagccataaagttgaaaatcacagtgctgcacgaagtttagta
tcgcttgcccttaatctgttaccagcatcagatgatctggttattgcacgtgagatggct
tcagaattgcttaaagttattggatctgaagataaggatcctacagctatgtctgaaaca
tttctagttattaatcattcaactaaaaatgtaattgctactgtgatgatgcaattggtt
gaattttctattgtcgatttggattgggctgtatcaaggctgaaggctgtctccaccttc
cgtcatgaatttgctaagcccaatggaaacattcaatttggcgaaaggctccctggaatg
ttgctggaagaagcaatctattccaggtcagaagcactggtggatgttatgtcatcattt
acagagatgaaccttaaagattctttagcagagcaattgttgaaattaagcgcaagattt
tacaagcttttggctcgtatgacaaagcttcggattgcgccgaaaggctgcagacagttc
ttgccaggacttaagtttcaaaagttagcagaagtaacttgcaaaaagcttaccagtccc
ctttacaacttcatggctctagttcaaacaaaccagcaggataatacgcagcataaggga
atcatcaacaagataaaacgagagaacagatgcattcctgacctaatatatcaaattgaa
gactatgagaggtatctcattcaactcagcaaactaacaaaagtgaatcttttgaggaac
gcaaaacgcagcactgcaagagatttcaagattatagagacaaagaagatggatacacct
gaacaagaaccgagtcattctggggatgaatctgaccaagaatctgacggtttaggtgaa
gacaaagaacctgaaaaggttgcaacgtatccagaatctgatggcgagggtgctgatgct
gctgaagatactgagagtgagaaggatgagcaggagattgtggtacccaagaaaagggtt
aagctgagtaaggttatccaagactcagatgaagaaggatga
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integrated database retrieval system
