Asparagus officinalis (garden asparagus): 109843377
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Entry
109843377 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109843377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109843377
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109843377
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
HECT type E3
109843377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ACP53EA
Motif
Other DBs
NCBI-GeneID:
109843377
NCBI-ProteinID:
XP_020267901
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All DBs
Position
5:complement(9440856..9450989)
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AA seq
1400 aa
AA seq
DB search
MDSATDEDSDSDVFGFLPSMIEVLKSSDDPSELIANLTALCDALAFTQYEDDLAQFPLKE
VVPVLIELAGKGVSPDAMSLVVRVFTYLLDLVPRAAKVLAKKGAIAVLCGPLMEIEYLDV
AEQCLVALEKLSRRQTVPCLKAGVIQTVLRFIDFFDIRVQRVAISIAMNACRKVPEDCLS
TVMDAVPTLCKLLDYQDQKLVESAATSLMKIVENFSHSSDLLDELCKHGVVKQSVKLISP
CSTVALSERTNIGMIELLARLANSSLLAVSILYELNINSILGNLLRRPHLSHSAHNSHSE
DDSRDQIFAALKLLNQLIPPMACDEKDIQLVSGKNEIIANEPKLSFQFAEDILPALIQAV
NSGASTRICYGSVSVILNYFLAVTPDVLRVLIKNANIPKFLASLLSQKNHHLLIPSLLIV
EVIMRELPGELLKPFVKEGVSHAINVISKQENWSQTDTGDTDDQTIANPPRCLCYAFDPC
SSPSSSESRTCRQRRCDLSPLAQRLMSTFFTETLISSMVFSENLRKLKSCCMEIDNNVHS
ALPNSSEKEEYLTQMLGELVKVLNEGESVSTFEFIESGIPRFLVHYLTNGDHFPRGVYSN
KTEAYHTVLKRFQTFTSMLLSGQSWQLFPLTSLVRHLQNALSSLESFPIILSSGYRPTPR
RADISAEKPTVHPCLQVNFVTEERETELCNYNNVLTVDFSSSWDTIEEFLWPKVKKKMSV
TKSAQETRHPGEKSAQIVDSQEQGENSMLQNNEDVKPKLVFLLDGKQLDHSVTLYQAILQ
DKINQDPAIIINREFWNEVHGVKFRKAKELQLRLPLKKGSFQVFADTSQSSLSCDTAGLC
RQNLSFFSSMLLSELPCKLERSNPAYDILYILKILEGINGFSFQLSSNEKSNAFAEGRLN
NADDLKVIAPSLPQTEFISSKLNSKLEQQMHDHLVLSTTTMPLWCTQIMVSFPFLFSLEA
RWKYFFLNTLGISRNHMQNSEKNEISNINDRRSLSTSLRRKKFKVHRDNILGSAVKMMNW
YASKKVLLEIVFNNEVGTGLGPTLEFYTLVSHELQKVGMGMWRGDHTSSGTKLHSRKSMV
VSDSSFVRAHSGLFPRPWSIRVESLNGVSFSKVLKNFFLLGQLVARAIQDGRILDFTFSR
AFYKLVLEKDLDIYDIQSFDPELGRTLIEFQALVKRKAFLESGELSEDGSALSFRNARIE
DLCLDFALPGYPDYAFGSSDSKMVNMSNLGEYISLVVDATVGSGISRQLESFKSGFNEVF
PIKALQIFTAQELEQIVSGEQDTWDNNEFQDHIKFDHGYSSTSPTAIMFLEVIQEFEVRQ
RRAFLLFVTGAPRLPPGGLAALRPKLTIVCKHCDNDADMELPSVMTCANYLKLPPYSSKE
RMKEKLLYAIMEGQGAFHLS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgccaccgacgaagactcggacagcgacgtcttcggtttcctcccgtcgatg
atcgaagtcctcaaatcctccgatgatccgagcgaattgatcgcgaatctcaccgctttg
tgtgatgccctagctttcacgcagtacgaggatgacctggctcagttccctctgaaggag
gtcgtccccgtactcatcgaattggcgggaaaaggcgtgagccccgatgctatgtcgttg
gtggttagggtttttacttacttgcttgatttggttccgagggcagcgaaggttcttgcg
aagaagggggcgatcgcggtcctttgcgggccgctgatggagatcgagtaccttgatgtg
gccgagcagtgtctggtggcgttggagaagttatcaaggaggcagacggtaccatgtttg
aaggctggggtgattcagacggtgctgagattcattgatttctttgacataagggtgcaa
agagttgcaatttccattgctatgaatgcgtgtagaaaagtccccgaggattgcctttca
actgtcatggatgctgttcctactctgtgtaagcttctagattaccaggaccaaaagctt
gttgaatccgctgctacaagcttgatgaagatagtggaaaattttagtcattcttctgat
cttctagatgagctttgtaagcatggggtggtaaaacaatctgtgaaattgatttctcca
tgtagtacggtggcactcagcgaaagaactaatattggcatgattgagcttcttgctcgg
ctagccaacagttcccttttggcagtaagtattctttatgaattgaatataaacagcatt
ctgggaaatctcctcagacgtccccatctttctcacagtgcccataactcacattctgaa
gacgactccagagatcagatatttgctgctctaaagttacttaatcagcttatccctcct
atggcatgtgatgagaaagatatacagcttgtttcaggcaagaacgagattatagccaat
gaacctaaattatcgtttcagtttgctgaggatattcttcctgcattaattcaggcagtc
aattctggagcaagtacacgtatatgttacggctctgtttctgttatattgaattatttt
ttggctgtcacacctgatgtcctgcgggtattaataaaaaatgcaaatattccaaagttt
ttggcaagtttattgtctcagaagaatcatcatctgctgattccatcccttctcatagta
gaagttattatgcgagagcttcctggtgaacttttaaaaccctttgtcaaggagggtgtt
agtcatgcaattaatgtaatttcaaagcaagagaattggtcccaaaccgacacaggggat
actgatgatcaaacaatcgctaatcctcctcgatgcttgtgctatgcatttgacccatgc
tcttctccttcatcatcagaatcaaggacatgcaggcaacggagatgtgatctttctcct
ttagcccaaagattgatgtcaacctttttcactgaaaccttgatctctagtatggtattt
tctgaaaatttacgaaagctcaaatcttgttgcatggaaattgacaacaatgtgcatagt
gctttacctaattcctctgaaaaggaagaatacttgacccaaatgttaggtgaacttgta
aaggtacttaatgaaggggaatcggtatcgacgtttgagtttattgaaagtggaattccg
agattcttggttcattatctgactaatggagaccactttcctagaggggtgtatagcaac
aagacagaagcttatcatactgtgctaaagagattccagactttcacttctatgttactt
tcaggtcaaagctggcaactgtttcctctgacatcactagtacgacatttgcagaatgca
ctgtcttcattagagagttttcctattattttgagttcaggttataggcctacaccaaga
agagctgacatttcagctgaaaagcccacagtgcatccatgcttacaagtaaattttgtg
acggaagaaagggagacagaattgtgcaactacaacaatgtattaactgttgacttctct
tcatcttgggatacaattgaagaattcttgtggcctaaagttaagaagaaaatgtctgtc
acaaagagcgctcaagagactcgacatcccggagaaaaatcagcacaaatagtagattcc
caagaacaaggtgaaaattctatgttgcagaataatgaagacgttaaaccaaaactagtc
tttcttttggatgggaaacagcttgaccactccgtaactttgtatcaagcaattctgcaa
gataagatcaatcaagatcctgctataattatcaacagagaattttggaatgaagtgcac
ggagtaaaattcagaaaggcgaaagagctgcaactaagacttccactcaaaaaaggatct
tttcaagtttttgctgacacttcccagtcatctctttcttgtgatacagcgggattgtgt
aggcagaacctctcattcttctccagtatgctgctgtctgagctgccttgtaagctggag
aggtcaaatcctgcctatgatatcctatatatactgaaaattttggaaggcataaatggt
ttttcatttcaactaagctcaaatgagaagagcaatgcttttgctgaagggaggctaaac
aatgctgatgatctcaaggtgatagcaccatcacttccgcagactgagttcataagcagt
aaactaaattccaagctggagcagcagatgcatgatcatttggtgttatccactacaacc
atgccattgtggtgtacacagataatggtttcattccctttcttgttttctcttgaagca
agatggaagtacttcttcctgaatacattaggcatttcaagaaaccatatgcagaattct
gagaagaacgaaatcagtaatataaatgatagaaggtcactttcaacctcattacgccgc
aagaagttcaaagttcatcgtgacaatattctcggttctgctgtgaaaatgatgaattgg
tatgctagtaagaaggttttgcttgaaatagtgtttaataatgaagttggtacaggcctt
ggtcctaccctcgagttttataccttagttagtcatgaactgcagaaagttggtatgggt
atgtggagaggagatcatacttcttctggtactaaacttcattcaagaaaaagcatggta
gttagtgactctagttttgttagagctcattctggattgtttcctcgcccgtggtccatt
cgtgtagagtccttgaatggtgtcagtttctccaaagtcctcaagaatttttttcttctc
gggcagcttgtagcaagagcaattcaagatgggaggattctggattttacattttccaga
gcattttataagcttgtacttgaaaaggatcttgatatttatgatattcagtcatttgat
cctgagcttgggaggaccttgatagagtttcaagctctggttaaaagaaaagccttttta
gaaagtggagaactttcagaagacgggagtgctctatcttttcggaatgcaagaatagag
gatctctgtctggactttgctcttccaggctatccagattacgcctttggctcaagtgac
tcaaaaatggtaaatatgagcaatctgggcgagtatatttcattggttgttgatgctact
gtgggaagcggaatttccagacagttggaatcttttaaatcaggatttaatgaggtattt
cccataaaagctcttcaaatttttacggcacaagagcttgagcaaatagtttctggggaa
caagatacttgggataataatgaattccaagatcacatcaaattcgaccatggttactca
tcaactagtcccactgcaataatgttcctagaagttattcaagagtttgaagttcgacaa
cgaagagctttcctgttgtttgtgactggagctcctcggctgcctccaggaggcttagct
gctcttagacctaaattgaccattgtctgcaagcactgtgataatgatgctgatatggaa
ctgccaagtgtgatgacctgtgctaactatctaaagctccctccttactcttccaaggag
cgaatgaaggagaaactgttatatgcaattatggagggacaaggggctttccatctctct
tga
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