Asparagus officinalis (garden asparagus): 109843466
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Entry
109843466 CDS
T05243
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109843466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109843466
Spliceosome [BR:
aof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
109843466
Complex B
109843466
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
109843466
NCBI-ProteinID:
XP_020267983
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All DBs
Position
5:complement(2155990..2160649)
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AA seq
247 aa
AA seq
DB search
MSTVTDGDAPSDAPNMTLYINNLNEKIKIEELKKSLQAVFSQFGKILEVLAFKTLKHKGQ
AWVVFEDVSSAAEALKRMQGFPFYDKPMRIQYAKTKSDVIAKADGTFTPREKRRRHDDRA
ERKRRDQNANQAGAGLNPAYAGAYGGVVPLLSQLPYPRGAKSILQELPPVPNNILFVQNL
PHDASSVMLQMVFSQYPGFKEVRMVEAKPGIAFVEYGDEMQASVAMQALQSFKITPQSPM
LINYAKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggtcaccgacggtgacgctccctccgacgcacccaacatgaccctctacatc
aacaacctcaacgagaagatcaagatcgaagaacttaaaaagtccctgcaagctgttttc
tctcagtttggtaaaatattggaagtgctagccttcaagacattgaaacataaaggacaa
gcatgggttgtctttgaggacgtctcttcggcggccgaggcacttaagaggatgcaagga
tttccgttctacgacaagcctatgagaatccaatatgctaagaccaaatcagatgttata
gctaaggctgatggtacttttactcctcgagaaaaaaggaggcggcatgatgatagagct
gaaaggaagcgcagggatcaaaatgcgaatcaggctggtgccggtttgaacccagcttat
gctggtgcctatggtggtgtcgtaccactgctatctcaactaccttatcctagaggagcc
aagtctatacttcaagagctcccacctgtgccgaacaacatcttgtttgttcagaacctc
cctcatgatgcttcttcggtgatgctgcaaatggttttcagccaatatcccggttttaag
gaggtcaggatggtcgaagcaaagcctgggattgcttttgtcgagtatggggacgagatg
caagcttcggtcgctatgcaagctcttcagagcttcaagatcactcctcagagtcctatg
ctcatcaattatgcaaagaaatga
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