Asparagus officinalis (garden asparagus): 109843483
Help
Entry
109843483 CDS
T05243
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
aof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109843483
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109843483
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aof01009
]
109843483
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109843483
03036 Chromosome and associated proteins [BR:
aof03036
]
109843483
Protein phosphatases and associated proteins [BR:
aof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109843483
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109843483
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109843483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
SCD
CLASP_N
Cnd1
INTS7_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
109843483
NCBI-ProteinID:
XP_020268007
LinkDB
All DBs
Position
5:59465863..59498423
Genome browser
AA seq
589 aa
AA seq
DB search
MAMVDEPLYPIAILIDELKNDDIQLRLNSIKRLPTISRALGEERTRKELIPFLSENNDDD
DEVLLAMAEQLGVFIPYVGGVEHAHVLLQPLETLCSVEETCVRDKAVESLCQIGGQMKAS
HIVDCFIPLLKRLAAGEWFTARVSSCGLFHIAYPSALDPLKAELRSIYGQLCQDDMPMVR
RSAATNLGKFAAKIEQSYLKTDIMSLFEDLTRDDQDSVRLLAVEGCAALGKLLEPQDCIA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGSEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCQILDPQLAIQQILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATLELLL
PTFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLANQLGVGFFDDKLGALCIQWLEDKVYSIRDAAATNLKRLAEECGVEWALQHIIPQV
VDKINSPHYLYRMTILHAISLLAPVMGAEITCEKLLPVIVAASKDRVPNIKFNVAKVLQS
LVPVVDHSRVQVVEKTIRPCLTELNEDPDVDVRYFAGTALEACDQVMVS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctatggttgatgaacccctttatccaattgcaattctcatagatgagttgaaaaat
gatgacatacaattgcgattaaactccataaagaggcttcctactatttcacgggcactt
ggcgaagaaagaacaagaaaagagttaataccttttcttagcgagaacaatgacgatgat
gatgaggttctgcttgcaatggcagagcagttgggtgtatttatcccatatgtcggaggc
gtggaacatgctcatgttttgcttcagcccttggaaacactatgctcggtagaggaaact
tgtgttagggacaaggctgttgaatcattgtgtcaaattggaggacagatgaaagcgagt
catattgtggactgcttcatccctttattaaagagactagcagctggtgagtggtttaca
gctcgagtttcttcatgcggactgttccatattgcctatccaagtgcgctggatcctttg
aaagcagaactaaggtctatatatggtcagttgtgtcaagatgacatgcctatggtgaga
aggtctgcggcaactaacctgggaaagtttgcagctaaaattgaacaaagttatttgaag
acagacatcatgtctttgtttgaggatctaactcgtgatgatcaagattctgtacgtctg
ttggctgttgagggttgtgcagcgctagggaagttgttggaaccccaggactgcattgca
catatacttccagttattgttaatttctcacaggataaatcctggcgtgttcgttatatg
gttgcaaatcagttgtatgagctttgtgaagctgttgggtcagagcctaccagggcggac
ttggtgccagcatatgttcggctacttcgtgataacgaggctgaagtacgcattgctgct
gccgggaaggtgacaaagttttgccagatcttggacccacaacttgcaattcagcaaatc
cttccttgtgtaaaggaactgtcatcagactcatcacagcacgttcgatcagctctggcc
tcggtaatcatgggtatggctcccgtcctgggaaaggatgcaactcttgagctactcctt
cccacgtttttgtctctgctaaaggatgaatttcctgatgttcggttaaatattatcagc
aaattagatcaagttaatcaggtgataggaatcgatctgctgtctcaatcattgctacca
gcaattgtggagcttgcagaagataggcattggcgtgtccggcttgccataattgaatac
attcctttgttggccaaccagttaggtgttgggtttttcgatgataaacttggtgccctt
tgcattcagtggctagaagataaggtttattcaattcgagatgcagctgccactaattta
aagcgtcttgcagaagaatgtggtgtggaatgggccctgcagcatataattccacaggtg
gtggacaagatcaacagtccacattatctatatcgcatgaccattcttcatgcaatttcc
ctgctagccccagtcatgggtgcagaaatcacttgcgaaaaactgttacctgtgattgtt
gctgcctccaaagacagggtgccaaacataaaatttaatgtggcaaaggtgttgcagtct
cttgtgcctgtagttgaccattctagagtgcaggtggtggagaagacaattcggccatgt
ctaactgagttgaatgaggacccagatgttgatgtcaggtattttgccggaacggcacta
gaggcatgcgatcaggtcatggtttcttga
DBGET
integrated database retrieval system
