Asparagus officinalis (garden asparagus): 109843710
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Entry
109843710 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109843710
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109843710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
HEAT_2
SOGP_2nd
Motif
Other DBs
NCBI-GeneID:
109843710
NCBI-ProteinID:
XP_020268254
LinkDB
All DBs
Position
5:66903937..66953492
Genome browser
AA seq
2046 aa
AA seq
DB search
MAQQSSRLQRLLTLLDTGSTQATRFAAAQQIGDIAKSHPQDLSSLWEKVSQYLRSKNWDT
RVAAARAIGSIAANIKHTSLNELFECIETELVECGLSDVSKGIRASCTNFHPNVTTGLSF
RSFDINKVLDYGSPLLASGGQEYDVACDNIKNPTERLARQKQNISRRLGLDVCGQFMDVS
EMIRDEDLLAQKFHLNVNGSNNVYYASRPGQNVQQLVANMVPNFRPKRLSARELNLLKRK
AKVNAKDHTKCRSEDDKLDVQHPQNQVTSKATCSDPLGNKKDFVDAVEDEDSVEHEGNGK
WPFRCFAEQLLHDMFDPVWEVRHGTIMALREILTHQGSCAGVLLPDLSSERPQFIDSDEK
NFTDSTKRGRDIDLNVQFEANQHEPTSKRQKNCEESVLPANITYSLDLETNHTADVKFDG
IPCNSSPTFVNGGLGTAHIKVESDVSTDGFSPRGKIEDVASLESFIEYESSISNINLPVD
RPQSSKLIKLMTLARHSWIKNWNFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQA
LGAVLKYMHPSLVHDTLKVLLQMQYRQEWEIRHGCLLGIKYLVAVRPELLQDLLVYVLPA
CKAGLEDPDDDVRAVAAEALIPTAASIVSLDDKMLHSIVMLLWDILLDLDDLSPSTSSVM
NLLSEIYSQPAMVPKMLETLKSAEKEELDLNKVSHAEEYREEVKDLDNPYILSSLTPRLW
PFMRHSIASVRHSAIRTLERLLEVGYRKSCFDSTAGRFWPASILGDALRIVFQNLLLESN
DDIIQSSKRVWSLLLECPVQDLEVVAVSYFRSWLQLAATAYGSPLDTTKMFWPVALPRKS
RFRAAAKMRAVKLESEYDRKFTSDPAQESVLQEKNFDVSTPCGKIIVGADSEKSVTHTRV
ATAEALGVFASRLPVGSLHVVIDPLWNDLISLSGVQRQVAAMVLVSWFKELRNADRSRDH
ENLLALLEHIRKWLLDLLACSDPAFPTKDSILPYAELSRTYAKMRNEANLLLQSAGSSGL
FQPLISSININLDTLSIDDAVNFTSKLSIPSDSASSATLGTHFVDDVQALKERLLSTAGY
LKCVQNNLHVTVSASVASSVVWMSELPAKLNPVILPLMAAVKREQEEVLQLKAAEALTDL
IFHCVGRKPSPNDKLIRNLCSLTCSDFNETPQAALVTSMDVIEDQNLLKSXSSIGXDEDR
SRIEGFISRRGSELALEHLCKRFGSSLFDRLPKLWDCLTEIFKAVNPQDQPLTDDRTILE
IGDSLNRKDPQALINNIQVVRSISYMVDQTLQPKFLSLLPCILGCLRHCHVAVRLAASRC
ITSMAKSMTAFVMGAVIGNVIPVSEFNSVQARQGGRMLADLELVQGLSSELVPYARLLVV
PLLKCMSDCDLAVRQSVTHSFAALVPLLPLARGLPPPIGLNDSLSRNTEDAQFLEQLLDN
SSIADYKLPVDLKVSLRRYQQEGVNWLSFLRRFKLHGILCDDMGLGKTLQASAIVATDIV
EQRACNNGKDPSSLIICPSTLVGHWAYEIEKFIDKSVIITLQYAGSVQERTSLQEQFDKC
NVVITSYDVVRKDIDYLGRLTWKYCILDEGHIIKNPKSKITCAVKQLKAEHRLILSGTPI
QNNVLELWSLFDFLMPGFLGTERQFQATYGKPLSTAKDSKCSAKDAEAGVLAMEALHTQV
MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEQFSSSNTKREISTLVKAHDTIST
AVEATSSKATSHVFQALQYLLKLCSHPLLAIGDKPPESLNDLILEVIPGCTDLLTELHGL
HHSPKLVALQEILEECGIGLDASSFDGPLSVGQHRVLIFAQHRSLLDIIERDLFQAHMKS
VTYLRLDGSVEQSRRFDIVKTFNSDPTIDVLLLTTNVGGLGLNLTSADTLVFMEHDWNPM
KDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSVANAVINSENASLKTMNT
DQLLDLFTPAPNTKLASSSNENPAEDSSIGVGGKAGSIIKGLGELWDQSQYDEEYNLKEF
LAKLNS
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaatcatctcgtcttcagcggttactcactttattggacactggttcgact
caagcaacaagatttgctgctgcacagcagattggggatatcgcaaaatcacatcctcaa
gacttgagctcactgtgggaaaaggtatctcaataccttcgtagtaagaactgggacaca
agagtagctgctgctcgcgcaataggctctatagctgcaaacatcaagcatacatctttg
aatgagctttttgaatgtattgaaactgagctggtggaatgtggcctttctgatgtctcc
aaaggcatcagagcaagttgcacaaattttcatcctaatgttacgacaggcctctctttt
agaagcttcgacatcaataaggtgttagattatggttctccattactggcttcaggggga
caggaatatgatgttgcatgtgataacatcaagaatccgacagagcggcttgctcgtcag
aagcaaaacatttcccgtcgtttgggtttagatgtttgtgggcagtttatggatgtaagc
gagatgattagggatgaagatcttcttgcccagaagtttcacctgaatgtgaacggatca
aataatgtatattatgcatcacgaccaggacaaaatgtacagcaactcgttgctaatatg
gttcctaattttcgtcctaaaagattaagtgcaagggagttgaatctgcttaaaagaaaa
gccaaggtaaatgcaaaagatcatacaaaatgtaggtccgaggatgataaattagatgta
caacatccccaaaatcaagtgacatctaaagcaacttgttcggatcctctgggcaacaaa
aaggattttgttgatgcagttgaagatgaagacagtgtggagcatgaggggaatggaaaa
tggccctttcggtgtttcgctgagcaactgcttcatgatatgtttgatccagtttgggaa
gtgcgccatggtactattatggctttaagagaaattttgactcatcaaggctcctgtgct
ggagttcttcttccagacttgagctcagaaagaccccagttcattgattcggatgagaaa
aatttcacagactcaacgaaaagaggtagagatattgacctaaatgtacaatttgaggca
aatcagcatgaaccaacctctaaaagacaaaaaaattgtgaggagtcagttctccctgca
aatattacatattcgttggatttggagacaaatcacactgcagatgttaaatttgatggt
atcccatgtaattcaagccccacatttgttaatggtggccttggtactgctcatataaag
gtggaatcagatgtttctacagatggttttagtcctcgagggaagatcgaggatgttgct
tctcttgaatcttttattgaatatgagagctcaatctcaaatataaatcttcctgtggat
cgtcctcaaagttccaaacttattaagttgatgacattagccaggcactcatggatcaag
aattggaactttttgcaagattgcgccattcgattcctttgcatactctctttagatcgt
ttcggggattatgtttctgatcaggttgttgcccctgttcgtgaaacttgtgcacaagct
cttggtgctgtgcttaagtacatgcacccttcactagtacatgacactttaaaagttcta
ctgcagatgcagtacagacaagaatgggaaattcgtcatggatgccttttgggaattaaa
tacttggttgctgtcagacctgaattgctccaggatcttctagtatatgtactgcctgca
tgcaaagccgggctcgaagatccagatgatgatgttagagcggttgcggctgaggcctta
atacccacagctgcttcgatagtttctctggatgataaaatgttgcattcaattgttatg
ttactttgggatatcctgcttgatttagatgaccttagcccatccactagcagtgtgatg
aatttgttgtccgagatttactctcagcctgcaatggtcccaaaaatgctggagacactg
aagtctgctgagaaagaagaattagatcttaacaaagtatctcatgcagaggaatatagg
gaggaggttaaagatttggacaatccttatattttatcctctttaacacctcgattatgg
ccatttatgagacacagcattgcatcagttcgtcattctgctataagaactttggagcgg
cttctagaagtaggatatagaaaaagctgttttgactccacagctggtagattttggcct
gcttctattctcggtgatgcactaaggattgttttccagaatctactattagaatcaaat
gatgacattattcaatcttcaaagagagtgtggagtctcctgcttgagtgtcctgtgcag
gatttagaagttgtcgcagtgtcatactttcgttcatggttacagcttgcagctactgca
tatggttctcctttagataccacaaagatgttttggcctgtagcacttcctcggaaaagc
cgattcagagctgctgccaagatgagagctgtaaagcttgaaagcgaatatgataggaag
tttacttctgatcctgcgcaagaaagcgttttgcaggaaaagaattttgatgtttccaca
ccttgtggaaaaataattgtcggcgcagatagtgaaaaatctgttactcatactcgagtt
gctactgcagaagctttaggtgtttttgcctctagattacccgttggttctctgcatgtt
gtgattgatccactatggaatgatctcatctcattatcaggagtccagagacaggttgct
gctatggttcttgtttcttggttcaaagagctcagaaatgcggaccgctctagagaccat
gagaatttgcttgcccttctggaacatataaggaagtggcttttagatttattagcatgt
tcggatcctgcatttcctacgaaggattctattcttccttatgcggaactttcaagaact
tacgctaagatgcgcaatgaagctaaccttcttctccagtcagctggttcttctggctta
tttcagcctttgatttcaagtattaatataaacttggatacactaagcattgatgatgcc
gtgaacttcacttcaaagctttcaatacccagtgactctgctagcagtgctactttaggg
acacactttgtggatgatgtacaagcattaaaagaacgtcttttgtctacagcaggatac
ttgaaatgcgttcagaacaatttacatgttactgtctcggcctcagttgcttcttctgtt
gtctggatgtcagagcttccggccaaacttaacccagtaattttgcccttgatggctgct
gtcaagagggagcaggaagaagtgttgcaactgaaggctgcagaagcacttactgatctg
atttttcactgtgttggacgcaagcctagcccaaatgacaagttaattaggaacctatgt
agcttgacatgctctgattttaatgaaacacctcaagcagcacttgtcacgtcaatggat
gtaattgaagatcaaaatttgttgaaaagttaaagttcaatcggtnntgatgaagatagg
tcaaggatagaaggcttcataagcagacgtggttcggaactagcgttggagcatctttgt
aagaggttcgggtcttcattgtttgacagacttccaaagctttgggactgccttactgag
attttcaaagccgtaaatcctcaagatcaacctcttacagatgaccgaacaatattagaa
attggagacagtttaaaccgcaaggatccacaagctctgataaacaatatccaggtggta
cgctcaattagttatatggtggatcagacattacaacccaaattcctctctcttcttcca
tgcatacttgggtgcttgcgtcactgccatgttgctgttaggttagcggcttcgaggtgt
ataacctccatggccaagtctatgacagcttttgtaatgggagctgttattggtaacgtt
atacctgtatcagaattcaactcagttcaagcaagacagggaggcaggatgcttgctgac
cttgagttagttcagggtttaagctcggagctggtgccttatgctcgtttacttgttgtt
cctcttctgaagtgtatgagcgactgtgatcttgctgtcagacagagtgtaacgcatagc
tttgctgctcttgtgcctcttctgccactagctagaggacttcctcctccaattggatta
aatgatagtttatctagaaatactgaagatgcacagtttttggaacagcttctcgacaac
tccagtattgctgattacaagctccccgttgaccttaaagtgtcattaaggaggtaccag
caagaaggagttaactggttatcctttttgagacgatttaagttgcatggaatattgtgt
gatgatatgggacttgggaaaactcttcaagcatcagcaatagtagctactgacattgta
gagcaacgtgcttgtaataatgggaaggacccttcatctttgattatctgtccttcaaca
ttggttgggcattgggcttatgagattgaaaagtttatagacaaatctgtgattatcact
cttcaatatgctggttctgttcaagaaaggacgtcacttcaagaacaatttgacaagtgc
aatgtcgtcataacatcgtatgatgttgtccgtaaagatattgactatcttgggaggctt
acctggaaatattgtattttagatgagggacacatcatcaagaacccaaaatctaaaatc
acttgtgcagtaaaacagttgaaagctgagcaccgccttatcttgagcggtacccctatc
cagaataatgtcttggagctgtggtctctttttgattttttaatgcctgggttccttggt
acagagagacagttccaggccacctatgggaaaccactttcgacagccaaggattcgaaa
tgctctgctaaggatgctgaagcaggggttcttgctatggaagcattgcatactcaggtc
atgccattcctcctccgtcgaacaaaagatgaagttttatctgatcttcctgagaaaatt
attcaggacagatattgtgacctaagtgctgtacagcttaaactttatgaacagttttct
agttcaaacacgaaaagagaaatttcaactttagtgaaggcacatgacaccataagtaca
gcagtagaagctacatcatcaaaagcaacttcacatgttttccaggcactacaatatttg
ctcaaactttgtagtcatccgttgcttgcaattggtgataagcctccagaatcccttaat
gatcttattttagaagttatcccaggatgcactgatcttctcactgagctccatggactt
caccactctcctaaattggttgctcttcaggaaattctagaagagtgcggaatcggctta
gatgcttcaagttttgacggccccctttcagttggacagcatagagttttaatttttgct
caacacaggtctctgcttgatataattgagagggaccttttccaagctcacatgaagagt
gttacatatctgcggctggatggttctgtagagcagtcgagacgttttgacattgtgaaa
acattcaattctgatcctactattgatgttctgcttctcacaacaaatgttggtgggctt
ggcttgaatttgacttctgctgatacgctggttttcatggaacatgactggaatccgatg
aaagatcttcaagcaatggacagagcacacaggttgggtcagcgtaaagttgtcaatgtc
catcgcctcataatgcgtggtaccttggaagagaaagtcatgagtctgcagaagttcaag
gtgtcagttgccaatgctgtcatcaattcagaaaacgccagtctgaaaaccatgaacaca
gaccaattgctcgacctgttcactccggcaccaaacaccaaattggcttcctcttccaac
gagaatccagcagaagattcaagcatcggtgttggtggaaaggctggaagcatcatcaaa
ggacttggagagctttgggatcaatcacaatatgatgaagagtacaatctcaaggaattc
ttagcaaagcttaacagctga
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integrated database retrieval system
