Asparagus officinalis (garden asparagus): 109843847
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Entry
109843847 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109843847
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109843847
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109843847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109843847
NCBI-ProteinID:
XP_020268399
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All DBs
Position
5:72292036..72306689
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AA seq
372 aa
AA seq
DB search
MESQLQSAXXXAFVEGGAQDACDDSCSICLEDFCESDPSTVTSCKHEFHLQCILEWCQRS
SQCPMCWQPISLKDPLSQELFEGVERERNIRSNQTRNTTIFHHPALGDFELQHLPVGVND
GELEERIMQHLAAAAAMGRAPRREGQRGRSATQGRPQFLVFSSHPNTPSIGSVSVSSAPR
GINEPSTAAASASTVITTTEEEPLPQVPNVNVGQADPVAILPSGASGANRPVILNTRISA
GQTTPVGQDRAGPSDFQSFSESLKSRLNAVSMRYKDSITKSTRGWKERLFSRNTSVADIG
SEVKREVSAGIASVSRMMERLDTRESRTASNSDQQSSESYSAMQPNSERVTEGGLANDSH
TSTSPATPTIPI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagttgcaatcggcgnnnnnnnncgccttcgtcgaggggggagcccaggat
gcctgcgatgattcttgcagtatatgccttgaggatttctgcgagagtgacccctcgacg
gtgactagctgcaagcatgagttccaccttcagtgcattctagaatggtgccagaggagc
tcccagtgccctatgtgttggcagcctatcagtttgaaggatcccctgagccaagagtta
tttgagggtgtagaacgtgaaaggaacattaggtccaatcaaacacggaataccactatt
tttcatcaccctgcacttggagattttgaattgcagcatttaccagttggtgtaaatgat
ggggaacttgaagagcgcatcatgcaacacttggctgcagcagcagcaatgggaagagct
cctagaagagaagggcaacgaggccgatcagcaactcaaggtcgtccacagtttttggtc
ttctcatcacatccgaataccccttctattggttctgtttctgtttcttctgctcctaga
ggtatcaatgagccatcaactgctgctgctagtgcttcaacagtaattactactactgaa
gaagaacccttgcctcaagtcccaaatgtaaatgtgggtcaagctgatccagttgctatc
ttgccatctggggctagtggtgccaataggcctgttatattaaatacgcggatttctgct
ggacaaactactccagttggtcaagacagagctggaccatcagactttcagtccttttct
gaatctttaaaatcacgcctaaatgctgtctcaatgagatataaagattctatcacaaaa
agtacaaggggatggaaggagaggttgttttcacgtaatacttctgtggcagatattggt
tctgaagttaaaagggaggttagtgctggaattgcttctgtttcacgaatgatggagcgt
ctggacacaagagaaagtagaacagctagtaattctgaccagcaaagttctgaaagttat
tcagcgatgcagccaaatagtgagagagtaacagagggtggtcttgcaaatgatagccac
acatctacttctcctgccacacctacaattcctatctga
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