KEGG   Asparagus officinalis (garden asparagus): 109843941
Entry
109843941         CDS       T05243                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109843941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109843941
   03036 Chromosome and associated proteins [BR:aof03036]
    109843941
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109843941
   Coactivators
    SAGA/TFTC/STAGA complex
     109843941
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     109843941
    STAGA complex
     109843941
    TFTC complex
     109843941
    SAGA complex
     109843941
    SLIK complex
     109843941
SSDB
Motif
Pfam: TFIID_20kDa Histone CBFD_NFYB_HMF TFIID-31kDa TFIIA Birna_RdRp_C
Other DBs
NCBI-GeneID: 109843941
NCBI-ProteinID: XP_020268522
LinkDB
Position
5:862271..864741
AA seq 253 aa
MSSQAKQSNVASLPSSSYRPQMRPPTMQQRPHLPQHHQQTSISQQQQQQKQHQLQQIQHM
QQQSSLQNQSQDNHPLRNQPNIPSQHQASQALVPTVQKSNVQALAQPGLGSNDTEEISND
IISRKRIRELVTQVDRSEKLRPEIEDDLLEIADDFIESIVTAACHLAKHRKSTTLEAKDI
LVHVERHWNMSLPGFSGDEIKCYKKPSTNDIHKERLAMVCLVLILQSSVSVSAFSLSYTC
IIIIIIIYHWSPV
NT seq 762 nt   +upstreamnt  +downstreamnt
atgtcatcccaagcaaaacaatcaaatgtagcttctttaccttcctcttcttacagaccc
cagatgagaccaccaactatgcagcaaaggcctcatcttccacagcatcaccaacaaaca
tcaatttctcagcagcaacagcagcagaagcaacaccaactacaacaaatacagcatatg
caacagcaaagctcactgcaaaaccagtcacaagacaaccatccacttaggaatcaacca
aatattccttcacaacatcaagcttcacaagctcttgtacctacagtgcaaaagtcaaat
gttcaagctttggcccaacctgggttgggatctaatgatactgaagagatcagtaatgat
attataagcaggaagcgtatacgagaattggtaacacaggttgatcggtctgaaaagttg
cgtcctgaaattgaagatgacctcctggagattgctgatgatttcattgaatctatagtt
acagcagcttgccatttggctaagcatcgaaaatcaactacattagaagcgaaggacata
cttgtacatgtagagagacattggaatatgtccttgcctggctttagcggagatgagatc
aagtgttacaagaagccgtccacaaatgatattcataaagagaggcttgcaatggtatgt
ttggttctaatactgcaatcctcagttagtgtttctgcattttctctttcttatacttgc
attattattattattattatttatcattggtcaccagtttga

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