Asparagus officinalis (garden asparagus): 109843968
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Entry
109843968 CDS
T05243
Name
(RefSeq) uncharacterized protein LOC109843968 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109843968
Enzymes [BR:
aof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
109843968
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109843968
Prokaryotic type
109843968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
V4R
Motif
Other DBs
NCBI-GeneID:
109843968
NCBI-ProteinID:
XP_020268556
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Position
5:76254854..76268993
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AA seq
318 aa
AA seq
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MSRNPRAQRYLVAVEYIGTRFFGSQKQPNCRTVTGTLEEAFCKFVGQPVSVVCSSRTDSG
VHALCNVCHVDVERISKRKPGEVLTPHEPGVVRRAVNHFLQKEGDIKVTDVRCIPGDFHA
RYKALERTYFYRLLSGPEPLSTFEKERAWHVPDELDILEMKKACKILTGHHDFSSFRASG
CQAASPIRTLDELHISEVLPSPYFPSYVERKEKDLHSPSDNLKASHLHIKKFDASTHKFG
HRRSHRCYIVTARARSFLYHQVRLLVGLLKSVGTGEVPTNKVEEILNAKSVAAASPMAPA
CGLYLGNVEYEFSNDFQR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaaccctagggcacagaggtacttggtggccgtcgagtatatcggaactcgc
ttcttcggttctcagaagcagcctaactgtagaaccgtcaccggcactctcgaggaggct
ttttgcaagtttgtcggccagccggtttcagttgtttgctcgagtcgaactgactcaggg
gtgcatgctttgtgcaatgtctgccatgttgatgtggagcgcataagtaaaagaaagccc
ggcgaagtgttaacaccacatgaacctggagttgttagacgggccgtaaaccattttttg
cagaaggaaggtgatataaaggtgactgatgttcgatgcattcctggagattttcatgct
agatacaaggcactagagcgaacatacttctaccgcttgctttctggaccagagcctttg
tcaacatttgagaaagaacgtgcttggcatgtacctgatgaattagatattctggagatg
aagaaagcttgcaaaatcttaactggacatcatgatttcagttcgttcagggcttctggt
tgccaggcagcatcaccaattagaactttggacgagctccatatatctgaagttcttcca
tctccatattttccttcttatgttgagagaaaagaaaaggacttacattcaccttcagat
aatttgaaagcatctcatttgcacattaaaaaatttgatgcaagcactcataagtttggc
catagaagaagtcatcgttgctacattgtaacagctagagcccgttcattcctttaccat
caggttagactactcgtaggtttgctcaaatctgttggtactggggaagtgcctaccaat
aaagttgaggaaatcttgaatgcaaagtcagtggctgctgcaagtcctatggctcctgct
tgtggtctctatctgggaaatgttgagtatgaattctcaaatgattttcaaagataa
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