KEGG   Asparagus officinalis (garden asparagus): 109844010
Entry
109844010         CDS       T05243                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109844010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109844010
Spliceosome [BR:aof03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109844010
 Complex B
    109844010
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 109844010
NCBI-ProteinID: XP_020268605
LinkDB
Position
5:complement(77679395..77707687)
AA seq 970 aa
MNFSMTRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGSEAPGSKAFVRGGMIDP
NEKMKTNSEGGNSKDGPSVPKKGTRYVPSFLPPPSNKGTEPEKKKDDERPREKEKGKPRA
IDNFLEELKLEQELREKRNQEREQRREGRYGDSSVPPSRFDELPDDFDPSGRLLGSFDDG
DPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRA
DGQAAKDEMQGVVVYDYELKIGWGKSVSLPAQALPAPPPGHMAIRNKEGNTVILSGPDGP
PVTSVTSQSSELVLTPNVPDILVLLPEDKHLQHVIDTMALHVLDGGCAFEQAVMERGRGN
PLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPPTPSPEQ
EKEATTTYAAGRSRRVELERTLTDPQRDEFEDMLRALTLERSQVKQAMGFALDNADAAGE
VVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFND
LYRSITGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRSGNSGVTPFHSICGD
APEIENKSSSEDLQEVDKINQDAALAMGKGAAMQELLSLPLTELERRCRQNGLSLLGGRE
MMVARLLNLEEAEKQRGYDRDDEMRYVHSHSGNHRTEDDSLKANNAGHREANRGMEPRSS
SKWSRHDEEGHGNVFSSLAPTLAIPQPELRAFPSKKEKYDPILPDSKWSRDDDGSDDEEN
QGGRGLGLSYSSSGSENADGDLEKAEEADMEAGANNLPFPESNMSEEHRQKLRRLEVAVI
EYRETLEERGIRNPEEIEKKVANHRRRLQLELGLLNSVEGSSRQSSQRTPTVRKGKREDG
HESSRKRHRSQSRSRSPQKRSSTRDRERVSDADRSQDRHRQREKSGSRERDDHERDRTRE
RDRDRRRKGK
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgaatttctctatgactcgaaagaagacccctttccagaaacatcgagaagaggaggag
gccaagaagaagagggaggaggatgaaactgctcgattgtatgccgagtttgtggagtcc
ttccaaggtagcgaagcacctgggtccaaggcttttgttagaggagggatgattgatcca
aatgagaagatgaagacaaattcagaaggtggaaattccaaagatgggccatctgttcca
aagaagggaactaggtatgtgccatcctttctacctccaccttctaataaagggaccgag
ccagagaaaaagaaggatgatgagaggccaagggaaaaggagaaaggaaaaccacgtgca
atcgataatttcctggaagagctgaagcttgaacaagagctgagggagaagcgtaatcaa
gaacgtgagcaaagacgcgaagggcgatatggtgatagttctgtgccgcctagccgtttt
gatgaattgcctgatgattttgatccaagtggaagacttctaggatcatttgacgatggg
gatccccagactacaaatttgtatgttgggaatctttcaccacaggtggacgaaaatttt
ctattaaggacgtttggaaggtttggtcccattgctagtgtgaaaataatgtggcctcga
acagaagaagaacgtaggaggcaaagaaattgtggctttgttgcattcatgaacagagct
gatggacaggctgccaaggatgagatgcaaggtgtagttgtgtatgattatgaattgaag
attgggtggggtaagtcggtatcacttccagcgcaggctctgcctgctcccccacctggg
cacatggctattagaaacaaggagggtaacactgtgattctatctggccctgatgggcct
ccagttacgtctgtgactagtcaaagttctgagttggttcttacaccaaatgttccagat
atactggttcttcttcctgaagataaacacttacaacatgttattgacacaatggcccta
cacgttctggatggtggatgtgcctttgaacaagctgttatggagagaggccgtggaaat
cctctttttaatttcttatttgagcttggatccaaagaacatacatactatgtttggaga
ctttactccttcgcccagggtgacacacttcaacggtggaggacagagccctttatcatg
ataactggaagtgggagatggattccaccctctttgccgcctactccaagtccagagcaa
gagaaagaagctaccaccacgtatgcagctggtagaagcaggcgtgtggagttggaaaga
acactaacagatccacaacgagatgaatttgaggacatgttgcgtgcgttaactttggag
aggagccaagtaaaacaagctatgggttttgctttggataatgctgatgcagctggagag
gtggttgaggttcttacggaatcgttgacgcttaaggaaacgcccataccgactaaggtt
gcaaggctaatgctggtttctgacatcctgcataacagtagtgctccagtgaaaaatgct
tctgcatatcggacaaaatttgaagctactttaccagacataatggagagcttcaatgac
ttatatcgtagtattacaggacggattactgccgaggccctcaaggaacgagttttaaag
gttcttcaggtatgggcagactggtttcttttttctgatgcgtatgtcaatggtttgcgt
gctacttttctccgatcagggaactctggtgtcacacctttccattctatatgtggagat
gcacctgaaattgaaaacaaaagtagttccgaagatcttcaagaagtggacaaaattaat
caagatgctgcactggcaatggggaagggagcagctatgcaagagttactaagtctacct
cttactgaactggaaagacgttgcaggcaaaatggtctctcacttcttggtggtagggaa
atgatggttgcaagactgctgaatctggaggaagcagaaaagcagaggggatatgatcga
gatgatgagatgagatatgtgcatagccattctggcaatcatagaacagaggatgacagt
ttgaaagcgaataatgctggtcacagagaagccaaccgtgggatggaaccaagaagctcg
agtaagtggagtcgacatgatgaagagggacatgggaatgttttttcatctttagcacca
acccttgcgattcctcagcctgagttaagagcattccctagcaagaaagaaaaatatgac
cctattttaccagattctaaatggtctcgagatgatgatggcagcgatgatgaagaaaac
caaggtggtcgaggtttaggcctaagttattcctcctctggaagtgaaaatgctgacggt
gatcttgagaaggcggaggaggctgacatggaagctggcgccaacaatcttccttttcct
gagagtaacatgagtgaagagcacagacagaaactcaggcgtttggaggttgctgtaata
gaatatcgtgaaactcttgaagagcgaggaattcgaaatccagaggaaatagaaaagaaa
gttgcgaatcatcggagacggcttcagttagagcttggtttactaaattctgtggaaggc
tccagtaggcaatcatctcagaggacaccaacagtgaggaagggcaagcgtgaagatggg
catgaatcttcaaggaagcggcaccgaagtcagagcagaagccgcagcccacaaaagagg
tcatcaaccagagacagggagagggtgagcgatgctgataggagtcaagatagacaccgt
caaagagaaaagagtggaagcagagaacgagatgaccatgaaagggatagaactagagaa
agggacagagataggagaaggaagggaaaatga

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