Asparagus officinalis (garden asparagus): 109844023
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Entry
109844023 CDS
T05243
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109844023
03036 Chromosome and associated proteins [BR:
aof03036
]
109844023
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109844023
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109844023
SLIK complex
109844023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
SLIDE
KH_PARP14_5
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
109844023
NCBI-ProteinID:
XP_020268616
LinkDB
All DBs
Position
5:complement(1575602..1619816)
Genome browser
AA seq
1696 aa
AA seq
DB search
MAFFRNFGDAVDSDQNLNDKVEDNDIEGGYNSLGSNRQMDLNFVENGVEMKEEDQYHSGD
ANAVKGTGPSATWGSNFWKDCQPMSNRTDEEVIVVNSDEDSDGQKDGEQFKTRQVDVPAD
EMLSDDYYEQDGEEQSDSLISGGLKLPSISVSRLPPRQLPVAENAAAKSANAAKYDEYDG
DEDYEETDEEEDDDPEDADFEPDFGESGNNTKNKAKMSDCDDFVEEDVDEDYDDLDLSDE
EDLEFNDNNRERKRLKVGRKAKSIKDYKSSVHNRQKRGKTFSDEEESSEKDSEQDTDEEF
SHKTRKALQVHKKGGAKSTGAMNINSRGGELRSSGRTVRKVSYVESEESEKEDEERSTKA
QKLVQDDADENDIDTIERVLWYQPEGMAEDAIKNNKSAQPSVLSTIPGPEPEWDNVEFYI
KWKGQSYLHCQWKSLSDLQNLTGFKKVLNYIKRVSDERKRKNALSREEAEVHDVSKEMEL
DLLKQYSQVERIFADRISKTSNDDIVPEYLVKWQGLSYAEATWEKDTDIAFAQYAIDEYK
VKCREEAMTMQGKMVDFQRRKSKASLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDT
NVVLADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPEMNIVI
YVGNRASREMCQQYEFYTGKKTGRQIKFNALLTTYEVILKDKDILSKIKWNYLMVDEAHR
LKNSEASLYIALSEFNTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKDVFVENYKNL
SSFNEIELGNLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFQ
SLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTRTTDSGKVERMVLSSGKLV
ILDKLLIRLQETNHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFN
APGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQDVVNIYR
FVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKESKKGTSMFDKNELSAILKFGA
EDLFKEDKDDEESKKRLESMDIDEILERAEKVEARGDDEEPGSELLSAFKVANFASGEDD
GTFWSRLIQPEATDPANEALAPRAARNIQSYAEDDQLETSNKRKKRGLEPQERPQRRSSK
GSDSVAHSLPMIEGASAQVRGWSFGNLKKKDASHFVRAVKRFGNKSQIDLIVAEVGGLIE
SATNEAQIELFEMLIDGCREAVREGNMDLKGTLLDFFGVPAKAHEILNRVEELQLLAKRI
KHYKDPIAQFRLTTQHKSPQWSKGCGWNQVDDARLLLGVHYHGFGNWEKIRLDPRLGLGR
KIAPVTLGERETFLPRAPNLDNRASALLQKEFANVNDKLTKGKGKGNRKSTMAESENIVT
LNTESKDRKWKFGSAKLNSQPTKQSLQKHKKVEPQVKEEGEISGSEPENYEQYKEEKWME
WCADVMEEEQQTLTRLERLQTTSLDLPKEKVLARIRKYLQQLGRKIDDIVQQHESACSQY
KQSRMSMRLWNYVSTFSNLTGEILYDIYAKLKEEKGGPSHFNGSGSESFHRNHSSEAWKR
RRRPNEDKQFQVPPPHPQVPMIHSEDLVPGPTPSVFVEPRPLLCSCEAMARLPKLMKFTG
QLYSIILFFNNHKVYQ
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atggcattctttaggaactttggagatgcagtggattcagatcaaaacttgaacgataaa
gtagaggataatgatattgagggaggctacaattccctggggagtaatagacagatggac
ttgaattttgtcgagaatggtgttgagatgaaagaggaagaccagtaccatagtggggat
gctaatgcagttaagggaacaggcccttctgcaacttggggttcaaatttttggaaagat
tgccagccaatgtcaaatagaacggatgaagaggtgattgtagttaattctgatgaggat
tctgatgggcagaaggatggtgagcagtttaagacaaggcaggttgatgtacctgcagac
gagatgctgtctgatgattattatgagcaggatggtgaagagcagagtgattctctaatc
agtggaggtctgaaacttcctagcatctccgtctctagattgccaccaagacagttgcct
gttgctgagaatgctgcagccaagagtgccaatgctgctaagtatgatgagtatgatggt
gacgaagattatgaggaaactgatgaggaagaagatgatgatccagaggatgctgatttt
gagccggactttggtgaatcaggcaacaacacaaagaataaggctaaaatgtcagattgc
gatgattttgttgaggaggacgttgatgaagattatgatgatcttgatctctcagatgaa
gaagatttggagtttaatgacaataaccgggagagaaagcggcttaaagttggacgcaaa
gcaaagtcaataaaggattacaaatcttctgttcataatcggcaaaaaagagggaaaact
ttctcagatgaggaggaatcatctgaaaaagactctgaacaggatactgatgaagaattt
agccataaaaccagaaaggcattgcaagtacataagaagggtggtgccaagtcaacaggt
gcaatgaatatcaattcacgtggtggcgagctacgctcatctggtaggacagtaagaaaa
gtatcttatgttgaaagtgaagaaagtgaaaaagaagatgaagagagatcaactaaggct
cagaagcttgtccaagatgatgctgatgagaatgacattgatacaattgagagggtcctc
tggtaccagccagaaggcatggctgaagatgctatcaaaaacaataaatcagcacaaccc
agtgtgctgagcaccatcccaggccctgaacctgaatgggataatgtggaattctatata
aagtggaaaggccagtcttatttacattgtcaatggaagtcattatctgatctccaaaat
ctgactggcttcaaaaaggttctgaactacataaaaagagtgagtgacgaaaggaaacgt
aagaatgccctatcacgtgaggaggccgaggttcatgatgtcagcaaggaaatggagtta
gatctcctcaaacagtatagccaggttgaaagaatcttcgcagacagaatcagcaaaacc
agcaatgatgatatagtaccagagtatttagtcaagtggcaaggtctctcatatgctgaa
gcaacctgggagaaggatacagatattgcatttgctcagtacgccatagatgaatacaag
gtaaaatgtcgtgaagaagccatgactatgcaaggaaagatggttgatttccaacggagg
aaaagcaaagctagcctacggaagcttgatgagcaacctgaatggttgaaaggtggcaaa
cttcgcgattatcagcttgagggcttgaattttcttgttaacagttggaggaatgataca
aatgttgttttagctgatgaaatgggtttaggtaaaactgttcaatcagtttccatgtta
ggtttcttgcagaatgctcaacaaattcatgggcctttccttgttgttgtacctctttca
accttgtcaaattgggcaaaagaattcaggaaatggcttcccgaaatgaacatagtcata
tatgttggcaatcgtgccagtagagagatgtgccagcaatatgagttttacactggaaag
aagactggcagacagataaagtttaatgcattgttaactacatatgaagtcatactgaag
gacaaagatatcctctcgaagattaaatggaattatcttatggttgacgaggctcacaga
ttgaagaatagcgaagcatctttgtacattgctctatcagaatttaacacaaaaaataag
cttcttattactggtactccattgcagaacagtgttgaagagctatgggcccttcttcac
ttccttgaccctgtcaagttcaacagtaaggatgtttttgtcgagaactataagaacctg
agttctttcaacgaaattgagcttggtaatcttcacaaggagctgagaccacacattctc
agaagagtcatcaaggacgtggagaagtctttgcctccaaaaattgagcgcatacttagg
gtggaaatgtctcctcttcaaaaacagtattacaagtggattttggaaaggaatttccaa
agtctgaataaaggagttcgtggaaatcaggtttcactcctaaacattgttgttgaattg
aagaaatgctgcaatcatcctttcctatttgaaagcgcagatcatggttatggtggagat
accaggaccactgatagtggtaaagttgagcgcatggttttgagcagtggaaaacttgta
atacttgataaactattgataaggctgcaggagacaaatcatcgagtgctaatattttct
cagatggtgcggatgttggatattctcgcagagtatttatcacttagaggatttcagttt
cagaggcttgatggcagtacaagggctgatctccgtcatcaagccatggagcattttaac
gcacctggcagtgatgacttttgcttcctcctttccacacgtgcaggcggattaggaatt
aatcttgctactgcagatactgtcataatctttgactcagattggaatcctcagaatgat
ttgcaggcaatgagtagagctcataggatcgggcagcaagatgttgtaaacatttaccga
tttgttaccagcaaaagtgttgaggaggatatactggagcgtgcaaagaaaaagatggtt
cttgatcatctggtgattcagaagctaaatgctgagggcagactggaaaagaaagaatca
aagaagggaacatctatgtttgacaagaatgagctttcggcaatactgaagtttggagcg
gaggacttatttaaggaagataaggatgacgaggagagcaaaaagagacttgaaagcatg
gatatagatgaaattcttgagagagctgagaaagttgaggctaggggggacgatgaggag
cctggaagcgagttgcttagtgctttcaaggttgccaatttcgccagtggtgaagatgat
gggacattttggagtcgattgatccaaccagaagctacagatcctgctaatgaagcactc
gctcctcgtgctgcaaggaatatccagagttatgcggaagatgaccagcttgagacgagt
aataaacggaaaaagaggggtctagagcctcaggaaagacctcaaagacgctcaagcaaa
ggctctgattctgtggcccattccttgcccatgatcgagggagcttctgctcaagttagg
ggctggtcctttgggaacttgaaaaagaaagatgcttcccattttgttcgtgcggtgaaa
aggtttgggaataagagccagatcgacttaatagtggctgaggttggcggtctaattgaa
tcagctactaatgaagcccaaattgagttatttgagatgctgattgatggttgtcgagaa
gcagttagagaaggaaatatggatctcaagggaactctgctagatttttttggagtgcct
gcaaaagcacatgaaattctaaatcgtgtggaagagcttcagctattggcaaaacgcatc
aaacactacaaagatcctatcgcccagtttagattgacaactcagcataagagcccacag
tggtcaaaaggttgtggctggaatcaagtggatgatgcaaggttgcttcttggagttcat
taccatggatttggaaattgggaaaagataagattagatcctagacttggtcttggaagg
aagattgcaccagtaactcttggggaacgggagacattcttgcctcgtgctcccaactta
gataatcgcgctagtgcccttttgcagaaggagtttgcaaatgtcaacgacaagctcaca
aaaggtaaaggcaaaggtaatcgtaaaagtacaatggctgaatcagaaaacattgttaca
ttgaacactgaatcaaaagatcggaaatggaaatttggctctgctaaattgaattctcag
ccaacaaaacagtctcttcagaaacataaaaaggtggaacctcaggtcaaagaggaaggt
gaaatatccgggtctgagccagaaaactatgagcagtacaaggaagagaagtggatggag
tggtgtgcagatgtcatggaagaggaacaacagaccctgacacggctagaaaggttgcaa
actactagtttagatcttccgaaagaaaaggtacttgctagaattcgtaagtatctgcag
caacttgggagaaagatcgatgacatagttcaacaacatgagtcagcatgcagtcaatat
aaacaatccagaatgtcaatgagattgtggaattatgtgtctacattttcgaatttgacg
ggggaaatactttatgacatatatgcaaaactcaaggaagagaaaggtggcccttcccat
ttcaacggttctgggtcagaatcatttcataggaatcacagctctgaagcatggaaacgc
cgaagaagacccaatgaggataaacaattccaggtgccgccaccccatccacaggtgcca
atgattcatagcgaagatctcgttccagggccaacaccaagtgtgtttgttgaaccgaga
cctcttctgtgttcttgtgaggccatggcaagacttcccaagttaatgaagtttacaggg
caactgtatagcattattcttttctttaacaatcataaagtgtatcagtga
DBGET
integrated database retrieval system
