Asparagus officinalis (garden asparagus): 109844055
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Entry
109844055 CDS
T05243
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109844055
Membrane trafficking [BR:
aof04131
]
Autophagy
Other autophagy associated proteins
Others
109844055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
ANAPC4_WD40
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
WDR55
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109844055
NCBI-ProteinID:
XP_020268649
LinkDB
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Position
5:15105752..15113281
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AA seq
412 aa
AA seq
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MSSVVASSQGSYSPARLSLMDSPRSWSLSSSLGQPEAPEPDLPDGNEAELLSLSWNQDYG
CFAAGTSHGFRIYNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGANPEYPPNKVM
IWDDHKSRCIGEFAFRSDVRAVKLRRDCIVVVLEHKIFVYNFTDLKLLYQIETLSNPRGL
CCLSHNANTSVLACPGLYRGQVRVEHFGLKVTKLISAHDSPISCFTLTLDGLLLATASVK
GTLIRIFNTMDGTRLQEVRRGADRADIYSLALSPTVKWLAVSSDKGTVHIFSLRVRVVGE
DASTQNVVGHGPELARQNSSCSLDALISSNSGANASSSLSFMKGVLPKYFSSEWSFARFH
LPEATRYSAAFGAQNTVIIIGMDGSFYRCSFDPVNGGGFMKNDNHRPKPATK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtggtcgcgtcatcacagggaagctattcccctgcaaggcttagcttaatg
gattcaccacgttcgtggtccctttcatcttctttgggtcaacctgaagctcctgaacct
gatttacctgatggcaatgaagctgaattattgtcactgtcttggaatcaggactatgga
tgctttgccgctggaacaagccatggattccgtatttataactgtgatccgttcaaggaa
acctttagaagggatctaaaaagtgggggatttggtatagtggaaatgctttttcgctgc
aatatactggctcttgttggcggtggtgccaatccagagtatccaccaaataaagtaatg
atttgggatgatcataagagtcggtgcattggtgaatttgctttcagatctgatgttcga
gctgtgaaattgagacgagattgcatagttgtggttcttgaacacaagatatttgtgtac
aacttcacggacctgaagcttctttatcagattgaaactctatctaatcctagggggtta
tgctgcctttcacataatgcaaacacctcggtgttggcttgccctgggctgtatcgagga
caagtccgagttgaacactttggcctgaaagttacgaagctcatcagtgcacacgattca
ccaatttcttgcttcactttgactttggatggactcctccttgcaactgcaagtgtcaag
ggtaccctgatcaggatatttaacacaatggatggtacacgcctgcaagaggtacgcaga
ggggcagacagagctgacatatatagcctagctctctctccaactgttaagtggttggct
gtgtctagtgacaaaggcactgtccatattttcagtcttagggttcgagtagttggagag
gatgcatctacccagaatgttgttggtcatggtccggaattagcacgccaaaactcttca
tgttcacttgatgctcttatatcttcaaactctggtgccaacgcaagctcatcattatct
tttatgaaaggtgtgctgcctaaatattttagttctgagtggtcatttgctcggttccac
ctaccagaagcaacacgctactctgctgcatttggagcccaaaacactgtaataatcatt
ggcatggatggcagtttctacagatgcagttttgatcccgttaatggcggaggtttcatg
aaaaatgataaccaccggccaaaaccagcaactaagtga
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