Asparagus officinalis (garden asparagus): 109844254
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Entry
109844254 CDS
T05243
Name
(RefSeq) importin subunit beta-1-like
KO
K14293
importin subunit beta-1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109844254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109844254
03036 Chromosome and associated proteins [BR:
aof03036
]
109844254
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
109844254
Pre-60S particles
109844254
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109844254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
HEAT_MROH2B_C
TOR1L1_N
HEAT_ECM29
Vac14_Fab1_bd
MMS19_C
TPR_DNAAF5
HEAT_Maestro
HEAT_GCN1_C_2
INTS7_N
Xpo1
Proteasom_PSMB
MMS19_N
HEAT_EF3_N
PDS5
DUF577
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
109844254
NCBI-ProteinID:
XP_020268811
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Position
6:complement(15204449..15209577)
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AA seq
871 aa
AA seq
DB search
MAMEVTQILLNAQSVDGAVRKHAEDNLKQFQDQNLPGFLLSLSGELANNDKPVDSRRLAG
LVLKNSLDAKEQHRKNELMQRWISLDASVKAQVKACLLQTLTSPVHDARSTASQVIAKIA
GIEVPHKQWPELVGSLLSSIHQQQPHVKQASLETLGYLCEEVPPQALDQDQVNKILTAVV
QGMSASEGNVDVRLAATRALYNALGFVQANFSNDMERDYIMRVVCEATLSPELKIRQAAY
ECLVSVSSMYYEKLASYMPDIFNITAKAVREDEEPVALQAIEFWSSICDEEIDILDDYGG
EFTADSEIPCHYFIKQALPALVPMLLETLLKQEEDQDQDEGAWNLAMAGGTCLGLVARTV
GDDIVPLVMPFIEENIAKPDWRQREAATYAFGSILEGPSPDKLAPIVNVALNFMLTALMK
DPNNHVKDTTAWTLGRIFEFLHGSTVESTVITNENCQQILTVLLQSMKDVPNVAEKACGA
LYFLAQGYEDVGSASPLSPFFQDIIQALLTVTHREDAGESRLRTAAYETLNEVVRCSTEE
TAPMVMQLVPVIMMELHKTLEAQKLSSDEREKQSEVQGLLCGCLQVIIQKLGSTETTKHV
FLQYADQMMDLFLRVFACRNATVHEEAMLAIGALAYATGANFAKYMQGFYPYLEMGLQNF
EEYQVCAITVGVVGDLCRALEDKILPFCDGIMTQLLKDLSSTQMHRSVKPPIFSCFGDIA
LAIGENFEKYLAYAMPMLQSAAELSAHAAASDVDMIEYTNQLRNGILEAYSGIFQGFKNS
PKTQLLMSYAPHILQFLDSLYTVKDMDDVVTKTAIGVLGDLADTLGSNAGTLIQQSVSCK
EFLEECLSSDDHLIKESADWARLAVSRALSG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagtgacccaaattctcttaaatgcccaatcagttgatggggcagttcga
aagcatgcagaagataacttaaaacagttccaagatcagaacctccctggctttttgctc
tccctttctggtgagttagcaaacaacgataagcctgtggatagcaggaggctagccggg
ttagtcctcaagaatagtttagatgcaaaagagcaacacaggaaaaatgagctcatgcaa
agatggatttccttggatgcgtctgtgaaagctcaggttaaagcctgcttgctccaaacc
cttacatcccccgttcatgatgccaggtccactgcatcgcaagtaattgctaagattgca
ggcattgaggtgcctcacaagcagtggcctgaacttgttggctctctcttgtcaagcatc
caccagcagcagcctcatgtgaagcaagcttctctagaaacactaggttacttatgtgaa
gaagttcctccgcaagctcttgaccaagaccaagtgaataagatactgacagccgtcgtt
cagggcatgagtgcatctgaagggaatgtcgacgtgaggttggctgctacacgagctctt
tataatgctctgggctttgtacaagcgaacttttcaaatgacatggaaagagactatatt
atgcgagttgtttgtgaagcaactctttcaccagagttgaagataagacaggcagcatat
gaatgtttggtctctgtctcatccatgtactatgagaagcttgcttcttacatgccagat
atattcaatatcacggctaaagctgtgagggaagatgaggagccagttgcccttcaggct
atagagttttggagctcgatttgtgatgaggagattgatattttagatgattatgggggt
gaatttaccgccgattccgagattccatgccattactttataaagcaggcactccctgca
ttggttcctatgctgttggagactctcctcaagcaagaagaggatcaggatcaagatgag
ggggcttggaatttagcaatggctggtggtacgtgtttgggtttggttgcacggactgtt
ggagatgatattgtgccccttgtgatgcctttcatagaagagaacatagcaaaaccagat
tggaggcagagagaggcagcaacatatgcatttggttctatattggagggtccatcacca
gacaagctagctccaattgtcaatgtggcacttaatttcatgctcactgccctgatgaag
gacccaaataaccacgtaaaggacaccactgcctggacactgggtagaatatttgagttt
cttcatgggtcgacagtggaatcaaccgtgataactaatgagaactgtcagcagatccta
accgtactgctccagagcatgaaagatgtccctaatgttgctgagaaggcatgtggtgct
ctttatttccttgctcagggctatgaggatgttggttcagcttctccgttgtcacctttc
ttccaggacattatccaggctctcctcactgtcactcacagagaagatgctggagaatca
cgacttaggacggcagcttatgaaacattgaatgaagttgttaggtgttctactgaagaa
actgctcccatggtaatgcagttggttcctgttataatgatggagctccacaagactctt
gaagctcagaagctatcatctgacgagagagagaagcaaagtgaagtgcaaggccttctt
tgtgggtgcttgcaggttatcatccaaaagttgggatcgactgagacaaccaaacatgtc
ttcttgcaatatgcagatcagatgatggatctgttcttgagggtcttcgcttgcagaaat
gccacagtgcatgaagaggctatgcttgctattggggcccttgcctacgctactggagca
aactttgcaaaatacatgcagggattctatccgtacttggaaatgggtcttcaaaatttt
gaagagtaccaagtctgcgcaataactgtaggagttgtgggagacttgtgcagggcattg
gaggacaagatcctgcctttttgtgatgggattatgacgcagctcctgaaggatttatct
agtactcagatgcatcgatcagtgaagccaccgatattctcatgctttggtgacattgct
ttagctatcggagaaaactttgagaagtacttggcctatgcaatgccaatgctccagagt
gccgcagagctatctgcccatgccgcggcaagtgatgttgatatgatcgagtacaccaat
caactaaggaatggaatcctagaagcatactctggtatattccagggctttaagaactca
ccaaaaacccagcttctgatgtcttatgcacctcacatccttcagttcttggatagtcta
tatacggtcaaggacatggatgatgtggtgacaaagaccgcaatcggtgtcctgggcgat
ttggctgatactcttggcagtaacgctggcactttaatccagcagtcagtctcatgcaaa
gagttcctggaagagtgcttgtcatcagatgatcatttgatcaaggagtcggctgattgg
gctagactagcagttagtcgggctttatctggctga
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