Asparagus officinalis (garden asparagus): 109844300
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Entry
109844300 CDS
T05243
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109844300
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
90S particles
Other 90S particles
109844300
Pre-60S particles
Other pre-60S particles
109844300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
MMS19_C
HEAT_Maestro
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
109844300
NCBI-ProteinID:
XP_020268872
LinkDB
All DBs
Position
6:complement(6201151..6218871)
Genome browser
AA seq
1082 aa
AA seq
DB search
MAQALKDQSIPQSPVAFFAATVSSLDRLSRDPNSGTDPVTSALLGFLAMTVPRVPPAVVR
SKWDSVAEMLVRVLGLVALPVSGVKAGLKCVGSLVKVGEKGNWAQVSAVYGVVLGFVTDP
RPKVRKQSHACLYDILQSIRGSSAIVLASEGVTNLFERFLLLAGGSDSSALDAAGGPRGA
MEVLYILNAIKNCLPLMSLKYATNIMKYCKSLVNLRQPILTKTVMEILQSFCSSPTAEVA
AEVLLDLLCTLAIYVAEKSLIADEMASTARLLHIGMKKVHSLNREICIVKLPLIFNTLGD
VLTSEHEEAIFAAAEAFKGLISSCVDEGLVKQGFDQITVNTGGGIRKSGPTIIERICSTM
EGLLGYKYNAVWDMSFQVLSAAFYQLGNFSSSLMAGTVRSLANLESLPDEDLPFRKRLHE
CIGSAVGAMGPEIFLSILPLNVDAENISDANVWLLPILKQYTVGAHLKFFSHNILDMIKV
LQQKSHKLEAEGRTFSAKSAEGLVYQLWSLLPAFCNYPVDTSTSFKDLQKVICLTLPRES
ELHGIMCSSLQILIGQNKSVLEEGSITLDDKLSDQERKAKEHYTQAVAEENLKAIRSSSS
KMLSVLSDTFLNSSKDNGGCLQSTIREFASISDKNIVKNFFKKVMIKLLRATEKASKGKQ
LESSSDMQIDESSNAASLLHARGLLLDLAVCLLPGVDKEEIDLLFTAIRSPLQDKEGSMQ
KKAYKTLATILKESDEFLSSKVDELIPLLLEATDSCHFSAKRHRLDSLYYLIVYVSKDTS
EQRKTESIIAFLTEIILALKEVNRKTRNRAYDLLVEIGHACGDEDQGGKKENLFEFFKMV
AGGLAGEKPHMISAAVKGLARLVYEFSDLVGAAYSLLPSSFLLLQRKNREIIKANLGLIK
VLVAKSKSEGLQMHLRTMVQGLLKWQDNTKNHFKAKVKLLLEMLVRKCGVDAVRAVMPEE
HMKLLTNIRKIKERKERKAKSDEDSESIHTKTSISRQSRWNHTRIFSDLGDDGMDDDSDA
ENAGAKTVVERHTKAASRASLRYWHRQITYIEIYRCHQHTVHKHMYICSYQSCFKSFLEV
LA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggccctcaaagaccagtccatcccccaatcccccgtcgccttcttcgctgcc
accgtctcctccctcgatcgcctctcgcgggaccccaattcgggtaccgatccggtaacg
tccgcccttctagggtttctggcgatgactgttcctagggttcctccggcggttgtgagg
agtaagtgggattcggtggcggagatgttggttagggttttggggcttgtcgctttgccg
gtgagcggagtgaaggcggggttgaagtgcgtggggagcttggtgaaggttggtgagaag
gggaattgggctcaggtttcagcggtttacggggttgttcttgggtttgttacagatccg
aggcctaaggtgaggaaacaatctcatgcatgtctgtatgatatcctacaaagcattcga
ggatcttcagctatagtgttggcgagtgaaggggttacgaacctttttgagagattcctt
ttgcttgctggtggatcggactctagtgctttggatgcagctggaggaccaagaggagct
atggaggtcctgtatattctaaatgcaataaagaattgtcttcctcttatgtcactgaaa
tatgcaacaaatatcatgaaatactgcaagtcactagtaaatctacgtcaaccaatcctc
acaaagaccgtaatggagattttgcagtccttttgctccagtccaactgcagaagttgca
gcagaggtgttattagatcttttatgcacactagcaatatatgttgctgaaaagagctta
atagcagatgagatggcatctactgcacggttgttgcatatcggcatgaaaaaagtgcac
agtctaaacagggaaatatgcattgtgaagctccctctcatatttaatactcttggagat
gtcttaaccagcgagcatgaggaagctatatttgctgctgccgaggcatttaaaggtttg
atatcttcttgtgtggatgaaggcttggtgaagcaggggttcgaccaaatcacagtcaat
actggaggaggaataagaaagtccggtccaacaattattgaaagaatatgctccactatg
gaaggcctccttggttataaatataatgcagtctgggatatgtcatttcaagtcctttca
gcagcattttatcaactagggaatttttcatcaagtcttatggctgggacagttaggagc
ctagcaaatttggagagtttaccagatgaagaccttccattcagaaagcggcttcatgaa
tgtattgggtcagctgttggagcaatggggcctgagatatttctaagcattctaccactt
aatgtggatgctgaaaacatctctgatgctaatgtctggctgcttcctattttgaagcaa
tatactgttggtgcccatctaaagtttttttcgcataatattttggacatgatcaaagtc
ctacagcaaaaatcgcacaagcttgaggcagagggccgcacattttcagctaagagtgca
gaaggccttgtttatcaattgtggtctttgttgccagccttttgtaactatcctgttgat
acttccactagtttcaaagatcttcagaaagttatatgcctcacacttcctcgggagtct
gagttgcatggtattatgtgttccagccttcagattctgattggacagaacaagagcgta
ctcgaggaaggctctatcacgttggatgataagctgtctgatcaagaaaggaaggcaaag
gaacattacacgcaagcagttgcagaagaaaatctgaaagctatacgctcatcatcgtcc
aagatgttatctgttctatctgatactttcttgaactcttcaaaagacaatggtggttgt
ttgcagtccaccattcgtgagttcgcttcaatatcagacaaaaatatagtgaagaatttc
ttcaagaaagtcatgattaaacttctgcgtgcgactgagaaagcaagcaaaggaaaacag
cttgaaagttctagtgacatgcaaattgatgaatcatcaaatgcggcatctctattgcat
gcaaggggcctcctattggatttagcagtttgcctcctgcctggtgtagataaggaagag
atagacttattatttactgccattagatctccgttgcaggataaagaaggttcaatgcag
aaaaaagcatacaaaacactggcgaccatactcaaggaatctgatgaatttctttcaagt
aaagtggatgaactaattcctttgctgttggaagccaccgattcatgtcacttctcagcc
aaacgccacagacttgacagtttatattacttgattgtctatgtttcaaaggacacatcg
gagcaaaggaagacggagagcatcattgcatttcttactgaaataattcttgcattaaaa
gaggttaatagaaaaacaagaaacagggcttatgatttgcttgttgagattggccatgca
tgtggagatgaagaccagggtgggaaaaaggaaaacctatttgagttttttaaaatggtt
gctggaggtttggctggtgaaaaaccacacatgatcagtgcagctgtcaaagggttagct
cggttggtttatgagttctcagatctcgttggtgcagcttatagcttgcttccatcttca
tttcttctcctccaaaggaaaaatcgagaaataatcaaagcaaatttgggattgatcaag
gtactagtagcaaaatccaagtcggagggactgcaaatgcatttaaggacaatggtccaa
gggttgttgaaatggcaagataatactaaaaatcactttaaagctaaggtcaaattactt
cttgaaatgcttgtgagaaaatgcggtgtagatgctgttagagcagtgatgcctgaggag
catatgaaactccttacaaacataagaaagatcaaagagcggaaagaaagaaaagcaaaa
tctgatgaggattcagaatcaattcatactaaaacaagtatttccaggcaaagcagatgg
aatcacactcgcattttttcagatttaggagatgacggcatggatgatgatagtgatgct
gaaaatgcaggagcaaagacagtggttgagcgccataccaaagctgcctcaagagcttcc
ttgaggtattggcatagacaaattacgtatatagagatatatagatgtcatcaacacaca
gtacacaagcacatgtacatatgttcataccaaagctgcttcaagagcttccttgaggta
ttggcatag
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