Asparagus officinalis (garden asparagus): 109844303
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Entry
109844303 CDS
T05243
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109844303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109844303
Membrane trafficking [BR:
aof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109844303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
109844303
NCBI-ProteinID:
XP_020268879
LinkDB
All DBs
Position
6:12265101..12275665
Genome browser
AA seq
1028 aa
AA seq
DB search
MQQGNEKLTNFPGKPAAAFPVPSQSSPPFRPSAPPVGFRPQGPSQSSMPFLASGPLAGPE
SSAYRSQPPSVKFNGPATPPPSSYPTQSSSNFPQSQVPPRFPSSGQPMPPLRGPPLGPPS
VPPPGYLQSQAQTPLFPGGFPPQTANQVPPRANVAPPPSESPFTATRPPMQAPLYGNVNT
VPGANVFQSQTDSQFSPPRPVSQPPGQAFPTASIPPTQPPFHAYQGGLMQPPPPPTGVPF
GFTQQMQYPTTGPPIGGTIQGLVEDFQSLSVGSVPGAVDAGIDPKSLPRPLDGDREPTSV
LKSYPLNCHPRFLRLTTHAIPNSQSLLSRWHLPLGAVVHPLAEVPDGEEVPVVNFGSAGV
IRCRRCRTYVNPYVTFTEAGRKWRCNLCGLLNDVPAEYLCGLDANGRRHDIYQRPELSKG
SVEFVAPTEYMVRPPMPPLYFFLIDVSVSAARSGLLEVVAKTIKSCLDELPGFPRTQIGF
LTFDSTLHFYCLKSSLTQPQMMVVADLDDIFLPLPDDLLVNLSDSRHVVDAFLDSLPSMF
QGNTNPESAFGPALKAAFMIMSQLGGKLLVFQSTLPSLGIGRLRLRGDDLRVYGTDKEHI
LRVPEDPFYKQMAAEFTKNQIAVDIYAFSDKYSDIASLGSLAKYTGGQVYYYPSFQAPIH
QEKLRHELARDITRETAWEAVMRIRCGKGVRFTTYHGHFMLRSTDLLALPAADCDKAFAM
QLSLEETLMTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVADLGEMYRQADTGAIISVL
SRLAIEHSLSHKLEDSRQLMQLKIVKSLKEYRNLYVTQHRLGGRLIFPESLKFLVLYALS
LCKSVALRGGYADAPLDERCAAGYSMMILPINRVLKLLYPSLLRVDEYLIKASGDFEETT
KPLPLTAQSLDREGLYIFDNGFNFVIWSGSMLPHELVDNIFGNLFAFPDISKAALCENDN
DMSRKFMKILNRLRQKDPSTYQLCYIVRQGEQPRESALLLSKFVEDQSAGISGYLEWILQ
IHRQSQTS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggggaatgaaaagctgacaaactttcctggaaaacctgctgcagccttccca
gttccttcgcagagttctcctccttttagaccctctgctcctcctgttggttttagacca
caaggtccttctcaatcgtccatgccattcttggcatctggacccttagctggcccagaa
tcatccgcttataggtctcaacctccatctgttaagtttaatggtccagccacccctcca
ccatcatcttaccccacacaaagttcgagtaattttccgcaatcacaagttcctcctcgg
tttccttcaagcggccaacctatgcctcctttacggggtccccctctaggtccaccatct
gttcctcctcctgggtatcttcaatctcaggcccaaactcccctgtttccaggaggtttt
cctccccaaactgcaaaccaagtacctcctagagctaacgtggcccctccaccatctgag
tcaccatttactgcaactagaccacctatgcaagcacctttatatggcaacgttaatacc
gttccaggtgctaatgtattccaatcacaaactgattcacagttttctcctcctagacca
gtttcccaaccacccgggcaagcttttcccactgcctctattccgccaacgcaacctccc
tttcatgcctatcaaggaggacttatgcaaccgcctccaccacctactggagttcctttc
ggttttactcaacaaatgcagtaccctactacaggacctcctataggaggtaccattcag
ggtctggtagaggattttcagtcattgtctgtgggttctgttcctggggcagttgacgct
ggaatagatccaaaatcattgccaaggccgttagatggtgatagggagccaacctccgtt
cttaaatcataccctttgaattgtcacccgagatttttgaggctgactacacatgccata
cctaattcccagtcgctgctttctaggtggcatttaccacttggtgccgtagttcatcct
cttgcagaagttccagatggggaagaggtgccagttgttaactttggatcagcaggtgtt
attagatgtcggagatgtcgaacgtatgtgaatccatatgtaacattcacagaggcagga
aggaaatggcgctgcaatctttgtggtttgcttaatgacgttccagcagagtatctctgt
ggtttagatgccaatggaaggagacatgatatttatcaaagacctgagctttctaaggga
agtgtggaatttgttgctccaactgagtatatggtgcgaccacctatgccaccactgtac
tttttccttattgatgtttcagtatctgctgctcgaagtggtctgcttgaggttgtagct
aaaacaataaagtcttgtctcgacgagctacctggcttccccaggacgcaaattggcttc
ttaacttttgacagcacattacatttctattgtctgaagtcttctttgacacagcctcaa
atgatggtggtagcagatttggatgatatattcttacccctgcctgatgatcttcttgta
aatctctctgattcaaggcatgttgtggatgcattcttagatagcttgcccagtatgttc
cagggcaatacaaatccagaatctgcctttggtcctgctctgaaggccgcattcatgatt
atgagccaacttggagggaaactgcttgtctttcagagtactttgccttctcttggcatt
ggtcgcctaaggttgcgtggtgatgatctccgtgtctatggaactgacaaagagcacata
ttgagggtccctgaagatccgttttataagcaaatggctgctgaatttacaaagaatcaa
attgcggtggatatctatgctttcagtgacaagtactctgatatagcttctctaggttct
cttgccaaatatactggtggccaggtatattattatccatctttccaggcacccatccat
caagagaaacttagacatgagttggccagggatatcactagggaaacagcttgggaagct
gtgatgcgcattagatgcggaaaaggtgtgcgttttactacttaccacgggcattttatg
ctaaggtccacagacttattagcccttcctgctgcggattgtgataaagcctttgcaatg
cagttatctttggaagagaccttaatgacaacccaaacagtgtacttccaagtggccctt
ctatatacttcctcctcaggtgaaagacgtatcagagtccacacagcagctgcacctgta
gtagcagatcttggtgaaatgtaccgccaagctgatactggggccattatctcagtcttg
agcaggcttgcaattgagcactcgttgtcccataagctggaggattctcgtcagctaatg
cagttgaagattgtgaagagcctaaaggaatatcgcaacctatatgtaacgcaacatcgg
ttaggtggacggttgatatttcctgaatctctaaagttcttggtactatatgcattatct
ctttgcaaatctgtagcacttcgtggcgggtatgctgatgctcctctagatgaacgatgt
gcagctggttatagcatgatgattttacccataaacagggtgcttaaacttctttaccca
agcttgcttagagtcgatgagtacctcatcaaggcctcaggtgattttgaagaaactaca
aaaccattgcctttaactgcacaaagtttagaccgagaaggcttatatatttttgacaac
ggattcaactttgttatttggtctggcagcatgctaccgcatgaattagttgataatata
tttggaaatctttttgccttccctgatatatccaaggctgcactttgcgaaaatgacaat
gacatgtcaagaaaatttatgaagattctaaacagattaagacaaaaagatccttcaacc
tatcagttatgctacatagtaagacaaggcgagcaacccagagagagtgccttgcttctt
tccaaatttgttgaggatcagagcgctggaatcagcggttacctcgagtggattctacaa
atacatcgtcaatctcaaacttcttga
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integrated database retrieval system
