Asparagus officinalis (garden asparagus): 109844328
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Entry
109844328 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: T-complex protein 1 subunit alpha
KO
K09493
T-complex protein 1 subunit alpha
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
aof03110
]
109844328
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aof03037
]
109844328
04147 Exosome [BR:
aof04147
]
109844328
Chaperones and folding catalysts [BR:
aof03110
]
Heat shock proteins
HSP60 / Chaperonin
109844328
Cilium and associated proteins [BR:
aof03037
]
Primary cilia and associated proteins
BBS-CCT complex
109844328
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109844328
Exosomal proteins of colorectal cancer cells
109844328
Exosomal proteins of bladder cancer cells
109844328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
109844328
NCBI-ProteinID:
XP_020268903
LinkDB
All DBs
Position
6:complement(33407422..33430747)
Genome browser
AA seq
538 aa
AA seq
DB search
MAFGSQIPDILGDRQSGQDVRTQNVMACQAIANVVKSSLGPVGLDKMLVDDIGDVTITND
GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI
ISGYRLAMREACKYVDEKLAVKVEKLGKDSLVNCAKTSMSSKLVANDSDFFANLVVDAVQ
AVKTTNARGEVRYPIKSINILXXXXLNGYALNTGRAAQGMPTRVAPARIACLDFNLQKTK
MQMGVQVLVSDPRELEKIRQREADITKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGA
IAVRRVRKEDMRHVAKATGATAVSTFADMEGEETFDPSFLGSADEVVEERIADDDVIMIK
GTKNTNAVSMILRGANDYMLDEMDRSLHDALCIVKRTLESNAVVPGGGAVESALSVYLEY
FATTLGSREQLAIAEFAESLLVIPKVLAVNAAKDATELVAKLRAYHHTAQIKADKQHFSS
MGLDLSKGTIRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDESQNEED
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggatcccagatccctgacatcctcggcgatcgccaatctggccaagacgtc
cgcacccaaaatgttatggcgtgccaagcaattgccaatgtcgtcaagtcttcgctcggc
cccgttggccttgataagatgctggttgatgatattggtgatgtgacaattactaatgat
ggggcgaccatactgaagatgttagaagttgaacaccctgctgctaaggtacttgtggag
ttggctgagcttcaagaccgtgaagtaggagatgggacgacatctgtggttattgtagct
gcagagttgcttaagagagcaaatgatcttgtgaggaacaagattcatccaacatctata
atcagcgggtacaggctcgcaatgagggaagcctgcaaatatgttgatgaaaaacttgct
gtaaaggttgagaagcttggaaaggattctcttgtgaactgtgcaaaaaccagcatgtcc
tcaaaattagttgccaatgatagtgatttctttgcaaatttggtcgtagatgcagttcag
gcggtgaagactacaaatgctagaggagaagtcagatatcccatcaagagcattaatatt
ctaaannnnnnnntgctgaacggatatgctttaaacaccggtcgtgctgctcaagggatg
cctactcgggttgctccagcaagaattgcttgtcttgattttaatcttcaaaagacaaaa
atgcaaatgggtgttcaggtcttagtttcagatcctagagaacttgaaaaaatacgtcag
agagaagctgatataacaaaagaaaggattgaaaaacttctaaaagcaggagccaatgtt
gtactaacaaccaagggaattgatgatatggcattgaagtattttgttgaagctggggca
attgctgtgcgacgtgtgaggaaagaggatatgcgtcatgttgccaaggccaccggtgca
actgcggtttcaacctttgctgacatggaaggggaggaaacatttgatccatcatttctt
ggatctgctgatgaagttgtggaggaacgtattgctgatgatgatgtgattatgatcaag
ggcacaaagaacacaaatgcggtatccatgattcttagaggtgcaaatgactatatgctt
gatgagatggatcggtcgttgcatgatgcattgtgcattgtgaagaggacccttgagtcg
aatgcagttgttcctggtggtggggcagtggagtctgcattatctgtatatctagagtat
tttgcaactacattaggttccagagagcagttagcaattgcagagtttgctgaatctctt
ttggttattcctaaggtacttgctgttaatgctgcaaaggatgcaaccgagttggttgca
aaactcagggcttatcaccatactgctcaaataaaggcagataagcaacatttttcaagt
atgggactagatctctcaaaaggtacaatccgcaataatcttgaagctggggttattgag
cctgcaatgagcaaagtgaagataattcagtttgctacagaggctgccataaccattctg
cgaattgatgacatgatcaagcttgttaaagatgaatcacagaacgaggaggattaa
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