KEGG   Asparagus officinalis (garden asparagus): 109844350
Entry
109844350         CDS       T05243                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109844350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aof03400]
    109844350
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109844350
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 ThaI
Other DBs
NCBI-GeneID: 109844350
NCBI-ProteinID: XP_020268932
LinkDB
Position
6:complement(22658779..22670980)
AA seq 362 aa
MKGLYMMSDASSDPNDGAGKRNPPSWMSSKGKESKPLKKKQDDAGEHTSSHAGGRDSAQA
NSQFAKLLDGVVFALSGFVNPERSTLRSQALEMGAEYRPDWTPDCTLLVCSFPNTPKFRQ
VASDCGTIVSKEWISECYNEKKLVEIERFLMHAGKPWRRNNDQLENKKGPKDALNEESGR
RPRRNSPEKFTGSAKSKVGLSNVTKDHFSPSKIKEWAIDDLNKTVTWLESQEEKPEASEI
KAIAAQGVITCLHDVIEALKEKKDIQLVMEQWMFIPHVVKQLLELETGRSKKGSLSKGEL
RELAITCKKIYESEFENVDSSLRRNGKQKAGIDDEDDAGFDSDRTIEMTEEEIEIACKEL
SS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaaaggtctatacatgatgtccgatgcaagctcagaccctaatgatggagcaggcaag
agaaatcccccttcttggatgagttctaaaggaaaagagagcaaacccctcaaaaagaag
caagatgatgctggtgagcacacttcaagccatgccggagggagggacagcgctcaagct
aattcacagtttgcaaaacttctggacggtgtggtctttgcattatcagggtttgttaat
cccgagagaagtacattacggtcacaggcgttagagatgggggcggaatatcggcctgat
tggaccccggattgcaccctacttgtttgttcatttccaaatactcccaaatttagacag
gttgcttcagattgtggaactattgtctcaaaggagtggatatcagagtgttataatgaa
aaaaagctagtcgagattgagagattccttatgcatgctggaaaaccatggcggaggaac
aacgatcagcttgagaataagaaaggtccgaaagacgcattaaatgaagaatctggaagg
cgacccaggagaaattcacctgaaaagttcaccggctctgccaagtctaaggttgggctt
tctaatgttactaaagatcacttttcaccttccaagataaaagagtgggcgattgatgac
ttaaataagacggttacatggctggagagtcaagaagaaaagccagaggcaagtgaaata
aaggctatagctgcacaaggggttattacttgtttacacgatgtgatagaagctttgaag
gaaaagaaggacatccagcttgtgatggaacagtggatgttcatccctcatgtcgtcaaa
caacttttagaactcgagactggaagaagtaaaaagggctccctctcaaagggggaactc
cgtgaactggccattacctgtaaaaagatttatgaaagcgagtttgagaatgtagatagt
tctttgagaaggaatgggaagcagaaagctggtattgatgatgaagatgacgcagggttt
gacagcgatcggacgattgagatgacagaagaagagattgagattgcatgtaaagaactg
agttcttag

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