Asparagus officinalis (garden asparagus): 109844359
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Entry
109844359 CDS
T05243
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109844359
03041 Spliceosome [BR:
aof03041
]
109844359
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109844359
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109844359
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_7
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
109844359
NCBI-ProteinID:
XP_020268947
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All DBs
Position
6:6335803..6346116
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AA seq
419 aa
AA seq
DB search
MMNQQQQQRLKQQALIQQGLMQQQYNHPLLAAPQIEPMFPSGNLPPGFDSSSCRSVYVGN
IHLQVTESLLQEVFQSCGVLEGCKLIKKDKSSYGFVDYYDRRSAALAIMTLNGRHLFGQP
IKVNWAYTSNQREDTSGHFNIFVGDLSPEITDNTLFACFSVFPSCSDARVMWDQKTGRSR
GFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCNWAAKGAGNEDKQNSDAKSVADVATGST
DDGQEAVNDDAPENNPQYTTVYVGNLSPEVTQVDLHRFFYLLGAGQLEEVRVQRDKGFGF
VRYSNHSEASLAIQMGNAKLLGGKPIRCSWGSKPTPPGTASTPLPPPAPAPFSALSATDL
LAYERSVALSKMTAANQALLQAQVPNAFKQAAAMGLSAGASQAIYDGGFQNAQQLMYFQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcaacagcagcagcagaggctgaagcagcaagctttgattcagcagggcctt
atgcagcagcagtacaatcacccccttttggctgctcctcagatagagccgatgttccca
agtggaaatctgcctccgggctttgattcaagttcatgccgcagtgtgtatgtcggtaac
attcatctccaagtcactgaatctcttcttcaagaggtcttccaaagttgtggtgtcctg
gaaggatgtaagctgatcaagaaagataagtcatcctatggatttgttgactactatgat
cgtagatcagctgcacttgctattatgacacttaacgggaggcacttgtttggccagcct
atcaaggtgaattgggcatataccagtaaccagagggaggatacatcagggcacttcaac
atatttgttggtgaccttagccccgagatcacggacaatactctatttgcttgcttttct
gtatttcccagctgctcagatgcaagggtcatgtgggatcaaaaaaccggacgctctaga
gggtttggttttgtttctttccggaatcaacaggatgcacaaagtgccatcaatgactta
aatggcaagtggcttgggaatcgacagattcgctgcaactgggcggcaaaaggtgcaggc
aatgaggacaaacaaaactcggatgcaaagagtgtggcagatgtggcaactggttccaca
gatgatggtcaagaggcagtgaatgatgatgctccagagaataacccacaatatactact
gtctatgttggtaacctttctcctgaggttacacaagtggatctgcaccgtttcttttat
ttgcttggtgctggacaactcgaggaggtcagagtacagcgggataaaggatttgggttt
gtaagatatagtaatcattctgaagcttcactggctattcagatgggaaatgcaaagctt
cttggcgggaagccaatcaggtgttcatggggaagcaagccaactccaccagggacagct
tcaacccctcttccacctccagcacctgctccattctccgcactctctgcaactgatctc
ctcgcttacgaacgttctgttgccttgagcaagatgacagcagccaaccaagcccttctt
caagctcaagtcccgaatgctttcaagcaagctgctgccatgggactcagcgctggagct
agccaagccatctatgatggtggatttcaaaatgcacagcagcttatgtatttccagtga
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