Asparagus officinalis (garden asparagus): 109844419
Help
Entry
109844419 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109844419
09124 Replication and repair
03420 Nucleotide excision repair
109844419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aof03051
]
109844419
03400 DNA repair and recombination proteins [BR:
aof03400
]
109844419
Proteasome [BR:
aof03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109844419
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109844419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
TECR_N
UBA_RAD5A
CUE
Dsc3_N
UBA_3
Motif
Other DBs
NCBI-GeneID:
109844419
NCBI-ProteinID:
XP_020269018
LinkDB
All DBs
Position
6:complement(8819890..8834964)
Genome browser
AA seq
393 aa
AA seq
DB search
MRVFVKTLKGTNFEIHVEPQHAIADVKKNIETVQGKNVYPAEQQLLIHQGKVLKDDTTLS
DNQVSEDSFLVIMLTKNKASSSGASSTKVAPANQAPPTTPVPANPSTPASVPPQAPPASQ
APAPASAPAPTATATAAPAPAVTVSSEADTYGQAASNLVAGNNFEQAVQGILDMGGGTWD
RDTVVRALRAAYNNPERAVDYLYSGIPENAEAPPVARTPTAXAVNPPTQASQPAAPTVPS
GGGPNANPLDLFPQGLPSMGSNAGGGNLDFLRNSPQFRALQAMVQANPQILQPMLQELGK
QNPQIMRLIQEHQADFLRLMNEPVEGAESDLLGQLGGAVPQTVEVTPEEAEAIERLEAMG
FDRALVLEVFFACNKNEEMTANYLLDHMHEFEE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcttcgtgaaaactctcaaaggcaccaattttgagatccatgtcgaaccccag
cacgcgattgcggatgtgaaaaagaatatagagactgtccaagggaaaaatgtctatcca
gctgaacagcagctgcttatacatcaagggaaggttttgaaagatgatacaacgctaagt
gataatcaagtttctgaggatagttttcttgtcataatgttgaccaagaataaagcttca
tcaagtggagcttcaagtaccaaagtggcacctgcaaaccaggccccacctacaactcct
gtgcctgctaacccttcgactccagcatcggtcccaccacaagctcctccagcttcacag
gccccggcacctgcaagtgcacctgctcccacagccacagccactgctgcaccagcaccg
gcagtaactgtatcctctgaagcagatacatatgggcaggcagcatcgaaccttgttgca
ggaaataattttgagcaagctgttcagggtattcttgatatgggtggagggacttgggat
cgagacactgttgtccgtgctttacgtgctgcgtataacaatcctgagagggccgttgat
tatttatacagtggaatccccgagaatgcagaagcaccacctgtcgcgcgaacaccaacg
gctnaagctgttaatcccccaacccaggcttcacaaccagcagctcccacagttccatcg
ggtggtggtccgaatgctaatcccttggaccttttccctcagggtcttccaagcatgggt
tcaaatgctggtggtggaaaccttgacttcttgcgcaatagcccgcagttccgagccttg
caggctatggtgcaggcaaatcctcaaatccttcagccaatgcttcaagaactaggaaaa
cagaatcctcagattatgagactcattcaggagcatcaagctgattttcttcgtctaatg
aatgaacctgttgagggagcagagagtgatctactgggtcaattaggaggtgcagtgcca
caaacggtggaggttactcctgaagaagctgaagcaattgaacgtcttgaggcgatggga
tttgatcgggcgctcgtcttggaggtgttctttgcttgcaacaaaaatgaggagatgaca
gcaaattacctcttggatcatatgcatgagtttgaagagtga
DBGET
integrated database retrieval system
