Asparagus officinalis (garden asparagus): 109844515
Help
Entry
109844515 CDS
T05243
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109844515
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109844515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
109844515
NCBI-ProteinID:
XP_020269162
LinkDB
All DBs
Position
6:4050100..4065003
Genome browser
AA seq
820 aa
AA seq
DB search
MPAIFSPESLSAAGKSSEKLSLPSLQSKMKSDPSGYLSELQLIIRRFESSLDLFHRSSAL
NPSSDPALAKELADLAMFLAHVSPFYAEELREFPNQVAELLREDGRALPSSLRCHLAQAL
ILLINRKVVGIEETLELFMELQVVGDRTLRKLAFSHVVHTIRRMNQKHKNEVHNRRLQTI
LRTMLEGQDEARAKRALVILCDLHRRRVWFDEQTANAICTACLHPSSKILTSALSFILGY
ERVEDENDSEESSGEDDTTSQKSQIVLSREAVYKAHHKGTAASKKKKKAKLQRVMRSMKR
QQRLSSEKSSSNSYSPLTHLKNAQGFAEELFSRLRKCNERFEVRMMIMKVIARTIGMHRL
VLLNFYPFLQRYVQPHQRDVTELLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRTEA
IAVGLNAIRELCLRIPLLMDEDLLQDLVLYKKSHEKAVSTAARSLITLFREICPSLLIKK
DRGRPIDPKARRKAFGEVSVAGNVPGIELLQDDDSMNSSSDGEVNPSAEENGEVEESDSV
GTDDENVVLEEEDEDAVSKEEDEEDSAEEDDAGEVHGSDTDSDDNDIEGYDEGINDQDGD
ADLDDDDADVRDDGDDGGQSDDCDDTDREKEEKSNPQKRKSVDYVGHLNAADTSLRALKK
IAVARTEVGPSDTTDGILSNEDFQRIKELMAKKEAKLALAQQGLVKKGVDARSAPFKVPS
SEQLSTKRVDPAVLEVNIRRKFSKEERLALVRAGREDRGKYQARAAVKQKKTGGLSNRQK
EHKKAMPLAAKRRKIARSRQEKKKQDRRSGKQFRGKKAWK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgatcttctcgccggagtctctctcggccgccggcaaatcctccgaaaagctc
agcctcccttctctccaatcaaagatgaaatcggacccaagcggatacttatcggagctc
caactgatcattcgccgcttcgagtcgtcgctcgacctctttcaccggagctccgccctc
aatccctcgtcggatcccgcactcgccaaggagctcgcggatctggcgatgtttctcgcg
cacgtgtcgccgttttacgcggaggagttgagggagttcccgaaccaggtcgcggagttg
ctgagggaggatgggagggcgttgccctcttcgttgaggtgtcacttggctcaggctttg
attcttcttattaatagaaaggttgttggtattgaagaaactcttgaattgtttatggag
cttcaagtagtgggtgatcggacattaagaaaattggcattttcgcatgttgtgcacaca
atacgacgcatgaatcaaaagcataaaaatgaagttcataaccgcagattgcaaaccata
ttaagaaccatgctcgaggggcaggacgaggcaagggccaagagggcacttgttattctt
tgtgatcttcatcgaaggagggtgtggtttgatgagcagacagccaatgccatttgtact
gcatgtcttcacccatcttcaaagattttaacttctgctctctccttcatcctgggttac
gaacgggttgaagatgagaatgatagtgaagaatctagtggtgaggatgacacaactagt
caaaagtcgcaaattgttcttagcagagaggccgtttacaaggcacatcacaaaggtact
gctgctagtaagaaaaaaaagaaagcaaaactgcaacgtgttatgcgcagcatgaaaagg
caacaacgtctatcgtcagaaaagagtagttcaaattcttactctcctttaacacatcta
aaaaatgcacagggtttcgcagaggagctgttttcccgtcttcggaaatgtaatgaacga
tttgaggttaggatgatgataatgaaagtaattgccagaactattgggatgcaccgcttg
gttttgttaaacttttatccctttcttcaaagatatgttcagcctcatcaacgtgatgtt
acagagttgctagctgcagcagtccaggcctgtcatgatatggttccacctgatgctgtt
gagccactattcaagcaaatagtaaatcaatttgtgcatgaccgctctcgcactgaggcc
attgctgttggactgaatgccataagggagctatgcctgaggatacctttgttgatggat
gaagatcttctccaagaccttgttctgtacaagaaatcacacgagaaagcagtctctaca
gcagctcggtcattaatcactttattcagagagatatgcccttcactattgatcaagaaa
gaccgtggccgccccattgatcccaaagccaggcgtaaagcatttggagaagttagtgta
gctggtaatgtccctggcatagagttgcttcaggatgatgactccatgaacagtagctcg
gatggtgaggtgaacccttctgcagaagaaaatggagaggtcgaagagagtgattctgtt
ggaaccgatgatgagaatgtagttttggaggaagaagatgaagatgcagtgtccaaggaa
gaagatgaggaggattctgcagaggaagatgatgcaggggaagttcatggcagtgatact
gatagtgatgataatgacattgaaggttatgatgaaggcatcaatgatcaagatggtgat
gctgatctagatgatgatgacgcagatgtcagggatgatggtgatgatggtggtcagtct
gatgattgtgatgacacagatcgagaaaaagaggagaagtcgaatcctcagaagaggaag
tctgttgactatgttggacatttgaatgctgcagacactagtcttcgagctttgaagaaa
atagcagtagccaggacggaagtcgggccatcagatacaactgatggaattctgtctaat
gaagatttccagcgtataaaagaattgatggcaaagaaagaagctaagctggccttggct
caacaaggtcttgtaaagaagggagtcgatgctaggtcagcaccttttaaagttccctct
tctgagcagctaagtacgaagcgtgtagatcctgctgtgcttgaggtgaacatcagaaga
aagttcagcaaagaggagagattggctttagtgagagcagggagagaagacagggggaaa
taccaggccagagctgctgtgaagcagaaaaagaccggtggtcttagcaatcgccaaaaa
gagcacaagaaggcgatgcctcttgctgcaaaaagaagaaaaattgctcgttctcgccaa
gagaagaagaaacaagatagaaggtcaggaaagcagttcaggggcaagaaagcttggaaa
taa
DBGET
integrated database retrieval system
