Asparagus officinalis (garden asparagus): 109844535
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Entry
109844535 CDS
T05243
Name
(RefSeq) GTPase LSG1-2-like isoform X1
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109844535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109844535
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
GTPases
109844535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Sec20
Cue1_U7BR
MeaB
Motif
Other DBs
NCBI-GeneID:
109844535
NCBI-ProteinID:
XP_020269194
LinkDB
All DBs
Position
6:complement(72277604..72295947)
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AA seq
569 aa
AA seq
DB search
MGGSKNKSQGLGRALIRHHNQQVQQSKERSKSLRQQSRVLESITDVTDIDAVLERAEEAD
RLYSADNPAPNLLINLDSDGGTSADERRRLQREEEALHAGSLRVPRRPPWNARMSLEELD
TNERREFLVWRRNLAKLEENENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPLFY
RCPDLEAYAREIDEHKKTLLLVNKADLLPLTVRQKWANYFDAHGILFLFWSAKAASASLE
GKSLISLNESPGSEVADTKIYGRDELLARLQAEAEAIASLRKVPNKNETHGSSSSASKHV
VVGFVGYPNVGKSSTINALVGGKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFS
SSRYEMIASGVLPIDRMTEHREAVQVVANRVPRQILENVYHITLPKPKAYESQTRPPSAS
ELLRTYCSSRGHVSSSGLPDETRAARQILKDFIDGKIPHYELPPGTINDELGNESDASDS
DEEVLEEPSLDQALDDLESFELSGGVLGKTAARAKKKNVGESYKHHKKPLRKKDRSWRVG
NDNGDGMPIVRVFQKPAVNFDAIKASNLN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggagggagcaagaacaaatcccaaggattaggtcgagctctgatccgccatcacaat
caacaagtccagcaatccaaggagcggagcaaatccctgcgtcagcagagtcgggttctc
gagtccatcaccgacgtcaccgacatcgacgccgtcttagagcgggccgaggaggccgac
cgcctttactctgctgacaaccccgcccccaatctcctcatcaacctggattcggatggg
gggacgtcggctgatgagaggaggaggctgcaaagggaagaggaagctctgcatgctggg
agccttcgagttcctcgcaggccgccatggaatgccaggatgtcgctcgaggagcttgac
actaatgagaggcgagagtttttagtgtggcgccgaaatcttgcaaaacttgaggagaat
gagaaccttgtccttactccttttgagaagaacctggatatttggcgacaactttggcga
gtgcttgaaagaagtgacctattggtgatggttgttgatgctagggacccattgttttac
cggtgtcctgatcttgaggcatatgcacgtgaaattgatgagcacaagaaaactttgctt
cttgttaataaggctgatcttttgccattaactgtgagacaaaaatgggcaaactacttc
gacgctcatggaattctctttctattttggtctgcgaaagctgcctccgcttctctcgaa
ggcaaatcattgatcagcttaaatgaatctcctggtagtgaagttgcagatacgaagatc
tatggcagagacgagctcttggctcgattacaagccgaagcagaggcaattgcatccctt
agaaaggttccaaacaaaaatgaaactcatggaagcagttcttcagcatcgaagcacgta
gttgtgggcttcgttggctaccctaatgtaggaaagagctcaacgattaacgctttggtt
ggcggaaagaggacgggagtcacctcgacccctggaaaaacaaagcacttccaaacgctc
atcatatccgatgagctgatgctctgtgactgcccgggtctagtcttcccttcattttcc
agctccagatacgaaatgatcgcgtcaggagtgctgcctatagaccgaatgactgagcac
agagaagctgttcaagttgtagcaaaccgagtcccacgacaaatcctcgagaatgtatat
cacatcactttgccaaagccaaaagcttatgaatcacaaacaaggccaccatcggcttca
gagcttctgagaacttactgttcatctcgtgggcatgtaagctctagtggtctccctgat
gaaacaagggcagctcgtcaaattttgaaagatttcatcgacgggaagattccacactat
gaactgcccccaggaacaatcaatgatgaactgggaaatgaatcggatgcaagcgattca
gacgaggaagtactagaggaaccgagcttggatcaggcgttggatgatctcgagtccttt
gagttgtctggtggagtgttgggcaaaactgctgctagagctaagaagaagaatgtgggg
gaaagttacaagcatcataagaagccactgaggaagaaagatagatcgtggagagttggg
aatgataatggtgatgggatgcctatagtaagagtgtttcagaagcctgctgttaatttc
gatgccataaaagcttccaatttgaactga
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