Asparagus officinalis (garden asparagus): 109844626
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Entry
109844626 CDS
T05243
Name
(RefSeq) F-box/LRR-repeat protein 4-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109844626
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109844626
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box_5
LRR_At5g56370
LRR_14
LRR_8
LRR_Zer-1
F-box
F-box-like
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
109844626
NCBI-ProteinID:
XP_020269326
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All DBs
Position
6:34414475..34418488
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AA seq
358 aa
AA seq
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MEKFGNDIVELILRRVSDRGDRNSCSEVCKQWTILEGLSRSSLRVLEPERIPSFLPRFPN
LTNLDIDRRISDENLKLIAQICPNLRTLNLGLHRSDWLRGFRSRDFGDKGLTAIAEKCRM
LEKVSLKRREQVRDAGVIALVKNAKNLAVLDLAWCSKITDEALDAMEGIVSLEVLYLEGC
SLITNSGLISLATGSLSKSLRVLDLAECDQITDHGIYFMPQMSCLQVLNLADCGPKITDE
GGFAISEIFSLRTLDLSWLINLSDETLVAFAEKCKNLVEISLTGCESVTGEGVRAFANHG
SLEMLGLARCSLICTEDIEEIVSRCGSLRHLVLDKVLRGWMSPSAKEKLSMLDRVDWV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattcggcaatgacattgtagaattaatcctaagacgagtctcagatcgagga
gatcgaaattcgtgctctgaggtctgcaagcagtggacgatacttgagggtctctcgaga
tcctctcttcgagtcctcgaacccgaaagaatccctagtttcttacctaggttccccaat
ttgactaatttagatatcgacagaagaatttctgatgagaatcttaagttgattgcacaa
atttgccctaatcttcgaaccctcaaccttggcctacaccgaagtgattggctcagaggg
tttaggtcaagggattttggggataaggggttaactgcaattgctgagaaatgtaggatg
ttggaaaaggtttcgttgaaaagaagggaacaagtgcgagatgctggggttattgctctt
gtgaaaaatgcaaaaaatttggctgttcttgatttggcttggtgtagtaagatcactgat
gaagccctagatgctatggagggaattgtctctttggaagtattgtatcttgagggttgc
tctttgattacgaattcgggtttgatttctttggcaactgggtcactgtcgaaaagtttg
agggttcttgatctggctgagtgtgatcagataactgatcatggtatctattttatgccc
cagatgtcttgtttgcaggtgcttaacttggctgattgtggcccgaagatcacagatgaa
ggaggctttgcaatttctgagatttttagtttgaggacattggatttatcgtggctgatc
aatctgtccgatgaaacccttgttgcttttgctgagaagtgcaagaacttggttgagatt
agcttaacaggatgtgaatcagtaacaggtgaaggggtccgtgcctttgcgaatcacggg
tcacttgagatgcttggattggctcgttgtagtttgatttgtaccgaggatattgaggag
atagtgtcacgttgtggttctttaaggcatctggtgcttgacaaggttttgaggggatgg
atgtcgccttcagcgaaggagaagttgagcatgttggatagggtggattgggtgtga
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