Asparagus officinalis (garden asparagus): 109844742
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Entry
109844742 CDS
T05243
Name
(RefSeq) protein OPAQUE1 isoform X1
KO
K10357
myosin V
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109844742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109844742
04131 Membrane trafficking [BR:
aof04131
]
109844742
03029 Mitochondrial biogenesis [BR:
aof03029
]
109844742
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aof04812
]
109844742
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109844742
mRNA cycle factors
P-body specific factors
109844742
Membrane trafficking [BR:
aof04131
]
Others
Actin-binding proteins
Myosins
109844742
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109844742
Cytoskeleton proteins [BR:
aof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109844742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Mod_r
Cnn_1N
CENP-F_leu_zip
AAA_22
Zeta_toxin
DUF1043
AAA_19
Flp1_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109844742
NCBI-ProteinID:
XP_020269443
LinkDB
All DBs
Position
6:7219534..7255282
Genome browser
AA seq
1520 aa
AA seq
DB search
MSFRKGSKVWVEDKDLSWTEAEVVEVKDKLVSLITAQRKKINVPPDKLLPRDADADLGGV
DDMTKLTYLSEPGVLYNLARRYALNEIYTYTGSILIAVNPFTKLPHLYNAHMMEQYKGVR
FGDLSPHVFAIADASYRAMMNEARSQSILVSGESGAGKTETTKLIMQYLTHVGGRAASDD
RTVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDTSGRISGAAVRTYLLERSRV
VQITDPERNYHCFYQLCASGKDAEKYKLGHPSEFHYLNQSKTYELDGVSNAEEYWKTRRS
MDIVGINYSDQEAIFRTLAAILHLGNIEFSPGKEHDSSIVKDTQSTFHLEMASELFMCDA
GLLLATLCSRSIKTREGTIIKALDCASATANRDVLAKTVYARLFDWLVENINKSVGQDPD
SRIQIGVLDIYGFECFKNNSFEQFCINFANEKLQQHFNEHVFKMEQEEYRNEEINWSYIE
FIDNQDILDLIEKKPIGIISLLDEACMFPKSTHETFSTKLFQSFKTHPRLEKAKFSETDF
TMSHYAGKVTYQSDSFLDKNRDYVIIEHCNLLSSSKCCFISGLFALLPEESSRSSYKFSS
VASRFKQQLQALMETLNATEPHYVRCIKPNSSNRPQKFENQSVLHQLRCGGVLEAVRISL
AGYPTRRTYSEFIDRFGLLAPELMDGSYDEMTVTEKILQKLKLENFQLGRAKVFLRAGQI
AILDSRRIEVLESAARLVQNRFRTYVTHKEFVLIKGAAISLQAYCRGCLARLLYEKRRQE
TATVVIQKHVRKWLLRRAFLHVHSAVLIIQSSIRSFSVRHKFTHLKEHRAATLIQAWWRM
RMAYVAFCQHRRAAVSIQCAWRQKLAKRELRRLRLAANETGALRDAKNKLEKKLEDLAWR
VALEKRLRVTSEETKAMEVSKLQKAMDLLNSELSAAKLATISEQKKNSVLLSQVDALAKD
KAMLESSLEEMAEVRKENFNLKNSVESLAKKNSDLESDLQKVRNHSNETLKKLQDMETKY
VQLQQNLQSMEDKLSTLQDENHILRQNAISTSPPANNLSVVPKFFSEKHSGEYTLPNINQ
SPTFESPTPTKYVAAVPRTLSESRRSRMTMEKHEEKHELLFRCIKEDLGFKDGKPVAACT
IYRCLLQWRAFEAERTIIFDFIVESINDVLKVDAEHDILPYWLSNTSALLCLLQRNLRSN
GLLTTPARRSAALGLSGKATPAQKTPLRLMGREDSVSHVDARYPAILFKQQLTACLEKIF
GLIRDNLKKELSPLLSLCIQAPKTTRAHAGRASKSQCGGVQQPLSIHWDGIVKFLDSLLA
RLRNNYVPSFFIRKLITQVFSFMNIQLFNSLLLRRECCTFSNGEYVKSGLAVLEKWIADV
TEEFAGTSWHELNYIRQAVGFLVIHQKRRKSLDEIQQDLCPALSVRQIYRICTMYWDDKY
STQSVSNEVVATMRDLVNKDSQSLMSNSFLLDDDMSIPFSTEDISKAIPAIDPMDVDIPP
QLRQIPSAHLPVRRLEIPPT
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagaaagggctcgaaggtgtgggttgaggataaggacttgtcgtggactgag
gctgaggtggtcgaagtcaaggataagctcgtgagcttgatcactgctcaaagaaagaag
attaatgttccgccggataagttgcttccacgggatgcggatgctgatctgggaggggta
gatgacatgaccaaattgacttatcttagcgagccgggggttctttataatcttgccaga
agatatgcactcaatgagatatatacatacacaggaagtatactcatagctgtcaaccca
ttcaccaagcttcctcatctatataatgcacatatgatggagcagtacaagggtgttcga
tttggggacttaagccctcatgtttttgctatagccgatgcgtcatacagagctatgatg
aatgaggcccgcagtcagtccattttggttagcggagaaagcggagctgggaaaactgag
accacaaagctaattatgcagtacttaacacatgttggcggtcgggctgctagtgatgat
cgtactgttgagcagcaagttttggaatcaaatccgctcttggaggcatttggtaatgca
aaaactgttcgaaatgataactcaagtcgctttggaaaatttgttgaaatccagtttgat
acaagcggtaggatatctggtgctgctgtaagaacctacctcttggaaaggtctcgtgta
gtacaaattacagatcctgagagaaactaccactgcttttatcagctatgtgcttctgga
aaggatgcagagaaatacaaacttggtcatccgagtgaattccattacttgaaccaaagc
aagacgtatgagctagatggagtaagcaatgctgaagagtactggaagacacggagatca
atggatatagttggtataaattacagcgatcaggaagcaatatttcgcaccctagctgct
attcttcatcttgggaacattgaattttctcctggaaaggaacatgattcttcaatcgtc
aaggacacacagtctacttttcatcttgagatggcctctgagttattcatgtgtgatgcc
ggtcttttgcttgcaacattgtgttctcggtcaataaagactcgtgaaggaactatcatt
aaagcacttgactgtgcttctgctacagctaatcgtgatgttcttgccaagactgtatat
gctcgattgtttgactggcttgttgaaaacattaacaagtctgttggtcaagacccggat
tccaggatacaaattggagtcttagacatctatggttttgaatgcttcaaaaataacagc
tttgagcagttctgcatcaactttgcgaatgaaaaacttcaacaacatttcaatgagcat
gtattcaagatggagcaggaggagtacagaaatgaagaaatcaattggagctatattgag
tttatagataaccaagacattttggatttgattgagaagaagcctattggaataatttct
cttctggatgaagcttgtatgttcccaaagtcaacgcatgagacattttcgaccaagttg
tttcaaagcttcaagacacatccaagattagaaaaagcaaaattttctgagacagatttt
actatgtctcattatgcaggaaaggtaacctatcaatcagattcgtttttggataaaaat
cgggactatgtcattatagaacactgcaatctgttatcttcatcaaaatgctgtttcatt
tctggtctgtttgctttactgccggaggaatcttcgagatcgtcttacaagttctcttct
gtagcttctagatttaagcaacaacttcaagctctcatggagacactcaatgcaacagaa
cctcactatgttcgttgtataaaaccgaactcctcaaaccgtcctcagaagtttgagaat
cagagtgtcctacatcaattgcgttgtgggggtgttttggaggctgttcgaattagtctt
gctggttatcctactcggagaacttactcggagtttatagatcgatttggactcttagct
ccagaattaatggatggcagttatgacgagatgaccgtgaccgagaaaatcctgcaaaag
ttaaaacttgaaaacttccagcttggcagggccaaagtgttcctcagagctggtcaaatt
gcaattttagattctcggcggattgaggttttggagagcgctgcaaggctcgtgcagaac
cgttttcgaacatatgttactcacaaggagtttgttctcatcaagggtgcagcaatttct
ctgcaagcatattgtagaggttgtttggctcgattgttatatgagaaaagaagacaggaa
acagcaacagttgtgattcagaaacatgtccggaaatggttgctgcggcgtgctttcttg
catgtccattcagcagttctgattattcagtctagtattcgcagtttttctgttcgccat
aaattcacacacctgaaggaacatagggcggccacgctaatccaggcatggtggaggatg
cggatggcctatgtggctttctgtcaacatcgacgtgctgctgtgtccattcaatgtgcc
tggagacagaaacttgcaaaaagagagcttcgaaggcttcgactggctgcaaatgaaact
ggtgccttgcgcgatgcaaagaacaaactcgagaagaagttggaggatcttgcttggaga
gtagctctcgaaaagagactacgggtaacaagtgaagaaacaaaagccatggaagtttca
aagcttcagaaagcaatggacttgttgaactctgagctgagtgctgccaaattggccact
ataagtgagcaaaagaagaattcggttcttctaagccaggttgatgcactagcgaaagat
aaggcaatgctggaaagcagtcttgaggaaatggctgaagtaaggaaggagaactttaat
ctgaagaattcggtagagtctctggccaagaagaactcagacttggagagtgatctgcag
aaagttcgaaaccatagcaatgaaacgttgaaaaagttgcaagatatggaaaccaaatac
gtacagcttcagcaaaatttgcagagcatggaggataagctgtctacattacaggatgaa
aaccacatattgagacaaaatgcaataagcacctcacctccagcgaacaatctttctgtg
gtcccaaaatttttctctgagaagcattctggagaatatacgcttccaaatattaaccag
agtcctacatttgaaagtccaacaccgacaaaatatgttgctgctgttccacgcaccctg
tcagaatcacggcgatctagaatgaccatggagaaacatgaggaaaaacatgaacttctt
tttcggtgcatcaaagaagatttgggcttcaaagatggcaagccagttgcagcttgtaca
atatatagatgccttctccaatggcgtgccttcgaagctgagaggaccattatatttgac
tttatagttgagtcaatcaatgatgttcttaaggtggatgctgaacatgatatcctgcca
tattggttgtccaatacatcagcgcttctatgcctcttgcagaggaatcttcgttcaaat
ggcttacttactacacctgctcggcgttctgccgctttggggttaagtggaaaagcaaca
ccagctcagaaaactcctttacgacttatgggacgtgaagatagtgtgtcacatgtggat
gcaagatatccagctatattgtttaaacagcagttgactgcctgcttggagaagattttc
ggattgattagggataatttgaagaaagagttatcaccacttcttagtctatgcattcag
gccccaaaaactactcgagcacatgctggtagagcatctaaatcacagtgcggtggcgtt
caacagccattgagcattcactgggatggcattgtcaaatttttagattcactattggct
cgattacgcaataactatgtaccgtcttttttcatccgtaagcttatcacccaggttttc
tcattcatgaacatccagcttttcaatagccttcttctgcggcgtgaatgctgcacattt
tccaatggggaatatgtgaaatctggacttgcggtgctggagaagtggattgctgatgtt
acagaggaatttgcaggaacttcttggcatgagttgaactacatcagacaagcagttgga
tttttggttatacatcagaagaggaggaaatcccttgatgagatacagcaagacctttgc
ccggcattgagtgtaaggcaaatctatagaatatgtacaatgtactgggatgacaaatat
agcacgcagagcgtatcaaatgaggttgttgcaacaatgagagatctggtgaacaaagat
tcacaaagtctcatgtcaaattcgtttttgttggatgatgatatgagcattccattttct
actgaagacatatcaaaggctatccctgcgatagaccctatggatgtcgatatcccaccg
cagcttcgacaaattccatcagcccacttgccagtacggcgccttgagataccgcctact
tga
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integrated database retrieval system
