Asparagus officinalis (garden asparagus): 109845109
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Entry
109845109 CDS
T05243
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109845109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109845109
03400 DNA repair and recombination proteins [BR:
aof03400
]
109845109
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109845109
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
109845109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
HeH
Motif
Other DBs
NCBI-GeneID:
109845109
NCBI-ProteinID:
XP_020269900
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Position
6:76148632..76163714
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AA seq
626 aa
AA seq
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MDLDPEGIFRDDSDSDNDFFQEREASKEYVVYLVDASPKMFSPAVTDEDEKMETHFHVAI
NCISQALKTQIIGRSNDEVAICFFNTREKKNLQNLNGVYVFDVMERESLDKPTAKLIKEF
SSIGENFMNSIGSQYGIISGSRENSIYNALWVGQALLRKGSTKNVSKRMLIFTNEDDPFG
TVTGATKKDMIRTTLQRAKDAQDLGISIELLPLSRPDEKFDVSVMYSDLIGLEAEEVSRF
LPSVGERLEDMTTQLKKRMFTKRKIRSIWFSISNDICIEVNTYALIRPTLPGAILWLDSV
TNLPLKSERSFICADTGALLHEPPKRFHPYRSESVVFSTHELSQIKKVSNVQLRLLGFKP
LDCLKDYHNLRPSTFIFPSDEEIFGSTRIFIALHRSMLRLNRYAVAFYGISAHPQLVALV
AQEEIMSSSGQVEPPGMHMIYLPYSDDIRQVEELHTAVDCVAPRATDEQIEKASNLLRRM
DLKDFSVCQFSNPALQRHYGILEALALGEDEMPDIKDETWPDEEGLARPRTAHALEDFKI
AVYGENHDQEEAESMASKSSASEATKKRKATAEAAVGKYNWADLADNGKLKDLTVAELKH
YLTAHNLPVAGKKEVLISRILTHLGK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaccccgagggcattttcagagacgactccgactccgataacgacttcttt
caggagagagaggcgagcaaggagtacgtcgtgtatttggtcgatgcctcgcctaagatg
ttcagtcccgctgtcaccgatgaagatgaaaagatggagacacatttccatgttgcgatc
aattgcatttcacaggccttgaagacgcagatcattggaagatcaaatgatgaagtcgca
atttgtttctttaacactagagaaaagaaaaatctacaaaatctaaatggtgtttatgtc
ttcgatgttatggagcgagaatctcttgataagcccactgcaaagctaattaaagaattc
tcttctattggagagaatttcatgaacagcattggtagtcagtatgggatcatatctgga
tcccgggaaaattccatatataatgctctatgggttggacaggctttgctgcgtaagggt
tccacaaaaaatgtgagcaagaggatgcttatattcaccaatgaagatgatccctttgga
actgttacaggggcaaccaaaaaggatatgatcagaacaaccctccaacgcgcaaaagat
gcacaagaccttggtatctcaattgagcttcttcccttgagcaggcctgatgagaaattc
gatgtgtctgttatgtattctgatttaattggtttggaagctgaagaggtatctcggttc
ttgccatctgtaggggaaagattggaagatatgactactcagctgaagaaaaggatgttt
acaaagcgtaaaattagaagcatctggttctcaatatcaaatgatatatgtatcgaagtg
aatacttatgctttgatccgtcctactttaccaggggcaattttgtggcttgattctgtc
actaatcttccattgaagtcggaaaggtctttcatatgtgcagatactggcgctttactt
catgaaccacctaaacgttttcatccgtacagaagtgagagtgttgtgttttctacacat
gagctgtctcaaataaagaaggtatcaaatgtccaacttcggcttctaggattcaagcca
ctggattgcttaaaggattatcacaatttgagaccatcaacttttatctttcccagtgat
gaggaaatttttggaagcactcgcattttcattgctttgcataggtcaatgttacgcctc
aaccggtatgcagtcgcattttatggaatctcggctcatcctcaactcgttgcactagtt
gcacaagaggagataatgagttcaagtggtcaagttgagcctccaggaatgcatatgatt
tatcttccatattcggatgatattagacaagttgaagagcttcacacagcagttgattgt
gtagcacctcgtgcaacagatgaacaaattgagaaagcctctaatttattacggcgtatg
gacttgaaagatttctcagtttgccaattctccaatccagcgctacagagacattatggg
attttggaggccttagctttgggtgaagatgagatgccagacatcaaagatgaaacttgg
cctgatgaagaaggcttagccaggcctagaacagcccatgcacttgaagatttcaaaatt
gcggtgtatggtgaaaaccacgaccaagaagaagctgaatccatggcttcaaaaagttct
gccagtgaggctacaaagaagaggaaagcaactgcagaagcagccgtgggaaaatacaac
tgggctgaccttgcagataatggaaagctgaaggatctaactgttgcggagttgaagcac
tatctaacagcacacaatctcccagtagctggaaagaaagaagttttaatcagcagaatt
ttgactcacttgggcaaatag
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