Asparagus officinalis (garden asparagus): 109845136
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Entry
109845136 CDS
T05243
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109845136
Membrane trafficking [BR:
aof04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109845136
Protein recycling
Other Rab GTPase associated proteins
109845136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
109845136
NCBI-ProteinID:
XP_020269938
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All DBs
Position
6:complement(59959895..59980036)
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AA seq
557 aa
AA seq
DB search
MESSGSESLGSSTAPLAWHDFLERMRHPSAADFVKSIKSFIVSFSNKAPDPEKDSVAVQD
FLANMEGAFRAHTLWAGSTDEELESAGEGLEKYVMTKLYNRAFASFSEDVKRDEELFEKI
SLIQKFIRPENLDIKPTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVITNLLLN
ASISSHDNPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVSEAAYFFTNILS
AESFIWNIDAQSLSMDEAEYQHSLEAARALLLGLSSESESQKNQTNEKSVEHKEETAKSK
SDINSSVRAQDLAGRTNDLKKGRAGKDQSLKNSSSVSDLQQCGASDLLKEEHLSKYFLEY
PFLFALAGDLTTEDVEKLLNSYKQLVLKYVCLCKGMGVNSSSLSVSTIQMATESTAESRD
SAELVTNNEKDEGLNNNPSNEKDEGLNDNQSNEKYGGLTNNQSSDSLFSGLDERELKVAA
DDSVDNPIGEKNNQLSGSLFSGLDEREEEAPADDSVANPVIDQPSDSLFSGLDGRESRMP
ADDSIANPTVEKNEVSE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagcggcagcgaatcgttggggtcatccacagccccgctggcgtggcacgat
ttcctcgagcgcatgcgccatccatccgccgctgatttcgtcaaatccatcaagagcttc
attgtctccttttcgaataaagctcctgatccagaaaaggatagtgttgcggtgcaagat
tttctagccaacatggaaggtgcatttagggctcatacactttgggctggaagcactgat
gaagaactagaaagtgctggcgagggattggagaagtatgtaatgacaaaactatataat
cgtgcatttgcatcattttcagaagatgtaaaacgtgatgaggaactctttgagaagatc
tcactgatacaaaaattcattcgaccagaaaatttggatatcaaaccaacctttcaaaat
gaaacatcttggctgcttgcacagaaggagcttcagaagatcaatatgtacaaggctcct
agagacaagcttgtttgtattctcaattgctgtaaagttatcaccaatttactattaaat
gcttctatttcatcacacgacaatcctcctggtgcagatgaattcctaccagtcctgatt
tatgttacaataaaggcaaaccctcctcaactccattcaaacttgttatacatacagaga
tataggcggcaatcacggttggtctcagaagcagcctatttcttcacaaatattctgtcc
gcggagtcctttatctggaacatagatgcacagtctctttcaatggatgaggcagagtat
cagcacagcctggaagcagctagagcactcctcttgggcttatcaagtgaatcagaaagc
cagaaaaatcaaacaaatgaaaaatctgtggagcacaaagaagagacagcaaaaagtaaa
agcgacataaacagctctgtgagagcacaggatcttgcggggagaacaaatgatcttaag
aaaggtcgtgctggcaaggaccaatcattaaaaaatagttcatctgtttcagatttgcaa
cagtgtggagcaagtgatcttcttaaagaagagcatctcagtaaatatttccttgaatat
cccttcttatttgcactcgctggtgatttaacaactgaagatgtagaaaagctcctcaat
agctataaacaacttgttctcaagtatgtgtgtctatgcaaaggaatgggtgtaaatagc
tcttctctttctgtgtctaccatccaaatggcaactgagtccactgcagagtccagagat
tcagcagagctggtgactaacaatgagaaggatgaagggttgaacaataacccgtcaaat
gagaaggatgaagggttaaatgataaccaatctaatgagaagtacggagggttaaccaat
aaccagtcaagtgatagtttattttcaggattggatgaaagagaactgaaagtggctgca
gatgactcagttgacaatccaattggggaaaagaataatcaactgagtggtagtttattt
tcgggtttggatgaaagagaagaagaagcgcctgcagatgactcagttgccaatccagtt
atagaccaaccaagtgatagtttattttcaggtttggatggaagagaatcgagaatgcct
gcagatgactccattgccaatccaactgtagaaaagaacgaggtatctgaatag
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