Asparagus officinalis (garden asparagus): 109845289
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Entry
109845289 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox-leucine zipper protein ROC2
KO
K09338
homeobox-leucine zipper protein
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aof03000
]
109845289
Transcription factors [BR:
aof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
109845289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
HTH_Tnp_1
TUSC1
MRP-L20
DciA_cyano_C
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
109845289
NCBI-ProteinID:
XP_020270114
LinkDB
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Position
6
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AA seq
748 aa
AA seq
DB search
MPAGIMLPARHVPSMIGHSSALRTAFGSSSALTLGQPNLLEGSQQLPLQHQHSNLLDIAQ
ITGESEMVRAAREQEDFESKSGSENIEGASGDDQDPNQRPKKKRYHRHTQHQIQEMEAFF
KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRAENEKLRAENM
RYKDALTNASCPNCGGPAALGEMSFDEHHLRLENARLREEIDRISGIAAKYVGKPMVSYP
LLSSPMASRSSLDLGVGSGFAPPPISGDILMEELIRMAQVGEPLWTQDLDNNIDALNDEE
YFRNFPRGIGPKPFGLESEASRETSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAITLEV
LSTGVAGNCNGALQVMSAEFQVPSPLVPTRESLFVRYCKQHGDGTWVVVDVSLDSLRPSP
VLRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKPLVNSGLAFGAKRWVSTLD
RQCERLASVMASNIPNGDGGVIQTAEGKKSMLKLAERMVISFCGGVSASTTHQWTTLSGS
GAEDVRVMTRKSIDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGV
VQEMAHIANGRDHGNCVSLLRVNSPNSNQSNMLILQESCTDSTGSYVIYAPVDVVAMNVV
LNGGDPDYVALLPSGFAILPDGPTGSVPGGGPISEVGSGGSLLTVAFQILVDSIPTAKLS
LGSVATVNSLIACTVERIKTAVSGEAAQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagggatcatgcttccggcaaggcatgtcccgtcgatgatcggccacagctct
gccctccgcaccgccttcgggtcatcatcggccctgacacttggccagccaaacttgtta
gaagggtctcagcagctcccattgcagcatcaacactctaacttgctggatattgctcag
atcactggagagagtgagatggtgagggctgcaagagaacaggaggattttgagagcaaa
tcggggagcgagaacatcgagggggcttcaggggatgatcaggatcctaaccagaggccg
aagaagaagagatatcatcgccatactcaacatcagattcaagagatggaggctttcttc
aaggagtgccctcaccctgatgacaagcaaagaaaggagcttagccgagagttagggctt
gagcccctacaagtcaaattctggttccaaaacaagcgcacccaaatgaagactcaacat
gagaggcatgaaaacactcagttaagagctgagaatgagaagctcagagccgagaacatg
cgatacaaggacgccctcaccaatgcttcgtgcccgaactgcggcggccctgctgccctc
ggcgagatgtccttcgacgagcaccaccttcgtctcgaaaatgccaggctcagagaagag
atcgacaggatatcgggaatcgcagcaaaatacgtaggaaaaccaatggtatcctaccct
ctcctctcctccccaatggcatcccgctcctccctcgacctcggtgtcggctcaggcttc
gccccgccgcccatctccggcgacattttgatggaggagcttataaggatggcccaggtt
ggtgagccgttgtggactcaagacttggacaacaacatcgacgctttgaacgatgaggag
tactttcgtaatttcccgcgcgggatcgggcccaaaccgtttgggctcgagtcggaggcc
tcgagagagacctcggttgtgatcatgaatcatgttaatctcgtggagatacttatggat
gtgaatcaatggtccacggtgttctctgggatagtgtcaagagctataactttggaagtg
ctatcaactggagttgcagggaactgcaatggagctttgcaagtgatgtctgcagaattc
caagttccatctccacttgttcctacccgagaaagtctcttcgtaagatactgcaaacaa
cacggcgatggtacttgggtagttgttgatgtctccttggatagtcttcgccctagccct
gtgttgagatgtcgaagaaggccatctggttgtctcatacaagaaatgccgaatggctac
tctaaggtaacttgggtggagcacgttgaagttgatgatagatctgtgcacaacatatac
aaacccttagtgaactcaggcttagcatttggtgcaaaaagatgggtttctactctagat
cgccaatgtgagcgccttgcaagcgtcatggccagcaacatccccaatggagacggcggt
gtgatacaaacagctgaagggaaaaagagcatgttgaaattagccgaaagaatggttata
agcttttgtggtggcgtgagtgcatctactactcaccagtggaccacactgtctggaagt
ggagctgaagatgttagggttatgactaggaaaagtatcgatgatcctggtaggcctcct
ggtattgttctgaacgcagctacttcgttctggctccctgttcctccgaaaagggttttt
gattttctccgtgatgagagttctcgcagtgagtgggatatcctgtctaatggtggtgtt
gttcaagagatggctcatatagctaatggccgtgatcatggtaactgtgtttctcttctt
cgagtcaatagcccaaactcaaaccagagcaacatgctgatcctgcaagaaagctgcact
gactcaactggctcctacgtaatctacgcccctgtagatgtcgttgccatgaatgtagtc
ctcaatggtggtgatcctgactatgtggccctcctaccctcaggtttcgccatcctgcct
gatgggcccaccggcagtgtgcccggtggcggtccaataagcgaggttgggtctggtggg
tcccttctaaccgttgcgttccaaatcttggttgattccatccctactgcaaagttgtcg
ttaggttcagttgcaacagttaatagtttaattgcttgcacggtggagaggatcaagact
gcagtctctggtgaggctgcacaatga
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