Asparagus officinalis (garden asparagus): 109845378
Help
Entry
109845378 CDS
T05243
Name
(RefSeq) nuclear ribonuclease Z isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109845378
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
109845378
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
109845378
Prokaryotic type
109845378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
109845378
NCBI-ProteinID:
XP_020270215
LinkDB
All DBs
Position
6:18368954..18377277
Genome browser
AA seq
291 aa
AA seq
DB search
MAKENSNDASSSKKRKGLEIEGYPIEGLSIGGQETCVIFPTMKMAFDIGRCPQRAIAQDF
LFISHAHMDHIGGLPMYVATRGLYSMKPPTIFVPISIKEIVEKLFEVHRAMDQSELKHNL
VGLNVGEEFQIRKDLKVKAFRTYHAIPSQGYVIYSVKQKLKQEYVGLSGNEIKNLRLSGV
EITYTVTSPEIAFTGDTKSDFIVDPDNTDALKARILVMESTFVDDAMSIQHARDFGHTHL
FEIVNYGDLFQNRAILLIHFSARYRLDEIEAAISKLPPSLSSRVFALTEGF
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaattccaacgatgcttcttcatccaagaagagaaagggtttggagatc
gagggttacccaatcgaagggctttcgattggagggcaagagacttgcgtcatattccca
acgatgaagatggcgttcgacatcggacgatgccctcagcgagccattgcccaggatttc
ctcttcatctctcatgctcacatggatcacattggaggcctgcccatgtatgttgctacc
cgaggcttgtacagcatgaaacctccaactattttcgttccaatatctataaaggagata
gtagaaaagctttttgaggtgcacagagcaatggaccaatctgaattaaagcacaatctt
gtaggcttgaatgtaggagaagagtttcagataagaaaggaccttaaggtgaaagctttt
agaacttatcatgctattcctagtcagggttatgtcatatattctgtgaagcagaaactt
aagcaggaatatgttggtctttctggcaatgaaatcaagaacttaagattgtcaggtgtg
gagattacttacactgtcacatcacctgaaattgcttttacgggagacacaaagtcagat
tttattgttgacccagacaatactgatgctttaaaagcgaggattctcgtcatggagagt
acttttgttgatgatgcaatgtcaatacagcatgcaagagattttggtcacacccacttg
tttgagattgtgaactatggtgatttgtttcaaaatagagctatccttcttatccatttt
tcagctcgataccgactggacgaaattgaggcagctatctctaagcttcctccatcttta
tccagtcgagtttttgctctaacagaaggcttctga
DBGET
integrated database retrieval system
