Asparagus officinalis (garden asparagus): 109845671
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Entry
109845671 CDS
T05243
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109845671
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
90S particles
Other 90S particles
109845671
Pre-60S particles
Other pre-60S particles
109845671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Hemerythrin
HEAT_Maestro
DUF6883
Motif
Other DBs
NCBI-GeneID:
109845671
NCBI-ProteinID:
XP_020270530
LinkDB
All DBs
Position
6:complement(6170725..6188449)
Genome browser
AA seq
1335 aa
AA seq
DB search
MPHFWLSCSLKPVSGVKAGLKCVGSLVKVGEKGNWAQVSAVYGVVLGFVTDPRPKVRKQS
HACLYDLLQSFRGSSAIVFASEGVTNLFERFLLLAGGSDSSALDAAGGPRGAMEVLTVLY
ILNAIKDCLPLMSIKYATNIMKYCKSLVNLRQPILTRTVMEILQSFCSSPTAEVAAEVLL
YLLCTLAIYVAEKSLVADEMASTARLLHIGMKKVHSLNREICIVKLPLIFNSLGDVLTSE
HEEAIFAAAEAFKGLISSCVDEGLVKQGFDQITLNAGGGIRKSGIRKSGPTIIERICSTM
EGLLGYKYNAVWDMSFQVLSAAFYQLGNFSSSLMAGTVRSLANLESLPDEVLPFRKRVAG
GLAGEKPHMISAAVKGLARLVYEFSDLVGAAYSLLPSSFLLLQRKNREIIKANLGLIKVL
VAKSKSEGLQMHLRTMVEGLLKWQDNTKNHFKAKVKVLLEMLVRKCGVDAVRTVMPEEHM
KLLTNIRKIKERKERKAKSDEDSESIHTKTSISRYEMLSMCEAQSGAQIISEIFLSILPL
NVDAENISDANVWLLPILKQYTVGAHLKFFSHNILDMIKVLQQKSHKLEAEGRTFSAKSA
EGLVYQLWSLLPAFCNYPVDTSTSFKDLQKVICLTLPRESELHGIMCSSLQILIGQNKSV
LEEGSITLDDKLSDQERKAKEHYTQAVAEENLKAIRSSSSKMLSVLSDTFLNSSKDNGGC
LQSTIREFASISDKIIVKNFFKKVMIKLLRATEKASKGKQLESSSDTQIDESSNAASLLH
ARALLLDLAVCLLPGVDKEEIDLLFTAIRSPLQDKEGSMQKKAYKTLATILKESDEFLSS
KVDELIPLLLEATDSCHFSAKRHRLDSLYYLIVYVSKDTSEQRKTESIIAFLTEIILALK
EVNRKTRNRAYDLLVEIGHACGDEDQGGKKENLFEFFKMVAGGLAGEKPHMISAAVKGLA
RLVYEFSDLVGAAYSLLPSSFLLLQRKNREIIKANLGLIKVLVAKSKSEGLQMHLRTMVE
GLLKWQDNTKNHFKAKVKLLLEMLVRKCGVDAVRAVMPEEHMKLLTNIRKIKERKERKAK
SDEDSESIHTKTSISRQSRWNHTRIFSDLGDDGMDDDSDAENAGAKTVVERHTKAASRAS
LRSIWKLQAAKSLPEDLLDQMEDDPLDLLDRHRTRSALQSSTRVKRKTECQDEPELDPDG
RLVVKEDGSYLRKPKSHQDHDQDTRSQTGSRYSVKSSAKAQKKRQKTSESGWAYTGNEYT
NKKSSGDVKKKDKLDPYAYWPLDRKLLNRRAERKASARKGMASVMKFTKKFEGKSASAAL
SAKGVNLKKKKRGNK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttttggttaagttgctctttaaagccggtgagcggagtgaaggcggggttg
aagtgcgtggggagcttggtgaaggttggtgagaaggggaattgggctcaggtttcggcg
gtttatggggttgttcttgggtttgttacagatccgaggcccaaggtgaggaaacaatct
catgcatgtctgtatgatctcctacaaagctttcgaggatcttcggctatagtgtttgcg
agtgaaggggttacgaacctttttgagagattccttttgcttgctggtggatcggactct
agtgctttggatgcagctggaggaccaagaggagctatggaggtcctgacagtcctgtat
attctaaatgcaataaaggattgtcttcctcttatgtcaatcaaatatgcaacaaatatc
atgaaatattgcaagtcactagtaaatctacgtcaaccaatcctcacaaggaccgtaatg
gagattttgcagtctttttgctccagtccaactgcagaagttgcagcagaggtgttatta
tatcttttatgcacactagcaatatatgttgctgaaaagagcttagtagcagatgagatg
gcatctactgcacggttgttgcatatcggcatgaaaaaagtgcacagtctaaacagggaa
atatgcattgtgaagctccctctcatatttaatagtcttggagatgtcttaaccagcgag
catgaggaagctatatttgctgctgccgaggcatttaaaggtttgatatcttcttgtgtg
gatgaaggcttggtgaagcaggggttcgaccaaatcacactcaatgctggaggaggaata
agaaagtccggaataagaaagtccggtccaacaattattgaaagaatatgctccactatg
gaaggcctccttggttataaatataatgcagtctgggatatgtcatttcaagtcctttca
gcagcattttatcaactagggaatttttcatcaagtcttatggctgggacagttaggagc
ctagcaaatttggagagtttaccagatgaagttcttccattcagaaagcgggttgctgga
ggtttggctggtgaaaagccacacatgatcagtgcggctgtcaaagggttagctcggttg
gtttatgagttctcagatctcgtcggtgcagcttatagcttgcttccatcttcatttctt
ctcctccaaagaaaaaatcgagaaataatcaaagcaaatttgggattgatcaaggtacta
gtagcaaaatccaagtcggagggactacaaatgcacttaaggacaatggtcgaagggttg
ttgaaatggcaagataatactaaaaatcattttaaagctaaggtcaaagtacttcttgaa
atgcttgtgagaaaatgcggtgtagatgctgttagaacagtgatgcctgaggagcatatg
aaactccttacaaacataagaaagatcaaagagcggaaagaaagaaaagcaaaatctgat
gaggattcagaatcaattcatactaaaacaagtatttccaggtatgaaatgttgtcaatg
tgtgaggcgcaaagcggggcacaaatcatctctgagatatttctaagcattctaccactt
aatgtggatgctgaaaacatctctgatgctaatgtctggctgcttcctatattgaagcaa
tatactgttggtgcccatctaaagtttttttcgcataatattttggacatgatcaaagtc
ctacagcaaaaatcgcacaagcttgaggcagagggccgcacattttcagctaagagtgca
gaaggccttgtttatcaattgtggtctttgttgccagccttttgtaactatcctgttgat
acttccactagtttcaaagatcttcagaaagttatatgcctcacacttcctcgggagtct
gagttgcatggtattatgtgttccagccttcagattctgattggacagaacaagagcgta
ctcgaggaaggctctatcacgttggatgataagctgtctgatcaagaaaggaaggcaaag
gaacattacacacaagcagttgcagaagaaaatctgaaagctatacgctcatcatcgtcc
aagatgttgtctgttctatctgatactttcttgaactcttcgaaagacaatggtggttgt
ttgcagtccaccattcgcgagttcgcttcaatatcagacaaaattatagtgaagaatttc
ttcaagaaagtcatgattaaacttctgcgtgcgactgagaaagcaagcaaaggaaaacag
cttgaaagttctagtgacacgcaaattgatgaatcatcaaatgcggcatctcttttgcat
gcaagggccctccttttggatttagcagtttgcctcctgcctggtgtagataaggaagag
atagacttattatttactgccattagatctccgttgcaggataaagaaggttcaatgcag
aaaaaagcatacaaaacactggcgaccatactcaaggaatctgatgaatttctttcaagt
aaagtggatgaactaattcctttgctgttggaagccaccgattcatgtcacttctcagcc
aaacgccacagacttgacagtttatattacttgattgtctatgtttcaaaggacacatcg
gagcaaaggaagacggagagcatcattgcatttcttactgaaataatccttgcattaaaa
gaggttaatagaaaaacaagaaacagggcttatgatttgcttgttgagattggccatgca
tgtggagatgaagaccagggcgggaaaaaggaaaacctatttgagttttttaaaatggtt
gctggaggtttggctggtgaaaagccacacatgatcagtgcagctgtcaaagggttagct
cggttggtttatgagttctcagatctcgttggtgcagcttatagcttgcttccatcttca
tttcttctcctccaaaggaaaaatcgagaaataatcaaagcaaatttgggattgatcaag
gtactagtagcaaaatccaagtcggagggactgcaaatgcatttaaggacaatggtcgaa
gggttgttgaaatggcaagataatactaaaaatcactttaaagctaaggtcaaattactt
cttgaaatgcttgtgagaaaatgcggtgtagatgctgttagagcagtgatgcctgaggag
catatgaaactccttacaaacataagaaagatcaaagagcggaaagaaagaaaagcaaaa
tctgatgaggattcagaatcaattcatactaaaacaagtatttccaggcaaagcagatgg
aatcacactcgcattttttcagatttaggagatgacggcatggatgatgatagtgatgct
gaaaatgcaggagcaaagacagtggttgagcgccataccaaagctgcctcaagagcttcc
ttgaggtcaatctggaagcttcaggcagctaagagcctgcccgaagacctgctcgatcaa
atggaagatgaccctctcgacttgctagatcgacacagaacaagatcagcacttcaatcc
tcaacccgagtcaaaagaaaaacagaatgtcaggatgagcccgagcttgaccctgatggt
cgcctagttgtaaaagaagacggcagttatctaagaaaaccaaagagtcaccaagatcat
gaccaagacacaagaagccaaactggaagtcgttattctgtaaaatcttcagccaaagct
cagaagaagcgccaaaagacatcagaatctggatgggcttatactggcaacgagtatact
aataaaaagtcgagtggtgatgttaagaagaaggataagcttgatccttatgcgtattgg
cctttggataggaagttgttgaatcgaagagcagagcgaaaggcttctgctcgtaaagga
atggcgagtgtgatgaagtttacgaagaagtttgaagggaagagtgcctctgctgctctc
tctgctaaaggagtgaacctaaagaagaaaaagagaggaaacaagtag
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