Asparagus officinalis (garden asparagus): 109845672
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Entry
109845672 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109845672
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aof01007
]
109845672
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109845672
03029 Mitochondrial biogenesis [BR:
aof03029
]
109845672
Enzymes [BR:
aof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
109845672
Amino acid related enzymes [BR:
aof01007
]
Aminoacyl-tRNA synthetase
Class I (A)
109845672
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
109845672
Prokaryotic type
109845672
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109845672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
TyrRSs_C
Motif
Other DBs
NCBI-GeneID:
109845672
NCBI-ProteinID:
XP_020270531
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All DBs
Position
6:complement(6188611..6190658)
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AA seq
533 aa
AA seq
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MNLSIRLDSLGATHPPVEKDFISPAILYYTFSKFIRSPSLPSSPSSQTHSRSTMAASAAS
RTFLPSLPKLLRPSRTFQLPRRLPCRASSSSSSSSSSTAXEQRGLIESITNENLRSASSS
GTNLKVYCGFDPTAESLHLGNLLGLIVLSWFPDVTHTPVAVIGGATGRVGDPSGKSLERP
ELDIETLENNSRAIKQLISKILGNSAGVFAKDAILDVGSENESDSVVILDNYDWWKGITL
LDFLKEVGRFARVGTMMAKESVKKRLSSEEGMSYTEFTYQLLQGYDFLYLFKNHGVNVQI
GGSDQWGNITAGTELIRKILQVEGAYGLTFPLLLKSDGTKFGKSEGGAIWLSPATLSPYK
FYQYFFSVPDVDVIRFLKILTFLRMEEITELEEGMKKPGYVPNTVQRKLAEEVTRFVHGE
EGLVEALKATEALRPGADTKLDWETIEGITEDVPSCSLAYDQVLNSCLVDLSVSTGLLNS
KSAARRLLKQGGLYLNNRRIDNDGKMIDVDDIVDGKVLLLSAGKKNKMVIRVS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaacctatccatccgcttggatagtttaggagctacccatccacctgttgagaaagat
tttatctcccctgcaattctctattatactttctcaaaattcatacggtctccatccctt
ccctcatctccgtcctcacaaactcactctcgttcgacgatggcggcgtcggcagcttct
agaaccttcctcccctcactcccgaagctcctacgaccttctagaaccttccaattgcca
cgtcgcctcccatgccgcgcctcctcgtcctcgtcctcgtcctcctcctccaccgccngc
gaacagcggggactcatcgaatccatcacaaacgaaaacctcaggtcagcgtcgtcctcc
ggcacgaatctcaaagtctactgtggcttcgacccgacggccgagagcctccacctaggt
aacctcctcggcctcatcgtcctctcctggttccccgacgtcacccacacccccgtcgcc
gtcatcggtggcgccaccggtcgcgtcggtgatccctctggaaaaagcctcgagcgaccg
gaattagatatagaaaccctagaaaataacagtagagcaattaagcagctaatctctaaa
atattaggaaattcagctggggtttttgctaaagatgcgattttggacgtgggttctgag
aatgagagcgattcggttgtgattttggacaattacgattggtggaaggggatcacgttg
ttggatttcctcaaagaggttgggaggttcgctagggttgggactatgatggcgaaagag
agcgtgaagaagagattgagctcggaagagggaatgagctacactgaattcacttaccaa
ttgctacaaggctatgatttcctctacttgttcaagaatcatggagtaaatgttcagatt
gggggaagtgatcaatgggggaatataaccgctgggactgaattgattcgaaaaatattg
caggttgaaggagcttatggattgaccttcccccttttgttgaagagtgatggcacaaag
tttgggaaatctgaaggaggagctatttggttatcacccgcgacgctgtcgccttataag
ttctatcagtatttcttctcggtgcccgatgtagatgttattaggttcttgaagatttta
acttttttgcgtatggaggagattacagagttggaagagggaatgaagaagcctggttat
gttccaaatacagtgcagagaaagctagcagaagaagtgacccgttttgttcatggagaa
gagggtttagttgaggcattgaaggcaactgaagctctaagaccaggagcagacactaag
ttagattgggaaacaattgaagggataactgaggatgttccatcatgttctttggcttat
gatcaggtgttaaattcttgtttggttgatctttcggtttctactggtttgcttaatagc
aagtctgcagcgagacgattactgaaacaaggggggctttatttgaacaatagaaggatt
gataatgatggcaagatgattgatgtggatgatattgttgatgggaaagtgttgttgttg
tctgcagggaagaagaataagatggttataagggtatcatga
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