Asparagus officinalis (garden asparagus): 109846248
Help
Entry
109846248 CDS
T05243
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109846248
Enzymes [BR:
aof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
109846248
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
109846248
Prokaryotic type
109846248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
109846248
NCBI-ProteinID:
XP_020271059
LinkDB
All DBs
Position
6:complement(63999718..64028252)
Genome browser
AA seq
962 aa
AA seq
DB search
MLHISSLKLLSSTPLLKLPFSSPSSLFFNPKTPSKLHHSHFTVLSYYSRRDRRKGRGGSA
PQRRGRSTITEVEMEEKKEAMGGFNKRRAEGRDAGGKRRNLQQKVQRLNPVSTICYVQIM
PQISLFLLEIAGVQDFVPPSCALSSSWICAALLKLYQLAHYYFCRLGLQRFCTEHKIKLS
KIDHIFLTRVCSETAGGLPGLLLTLAGIGEEGMSVNMWGPSDLKYLVDAMKSFIPHAAMV
CAHSFGETQDKSEVAVSFPDTGRITDPIVLIDDEVVRLSAIPLRPSQSNNGSTLKPGDIA
VVYVCELPEIKGKFDPVKASSLGLKPGPKYRELQLGKSVMSDYQDIMVQPSDVLGPSVPG
PIVLIVDCPTSDHMLELFSLQSLECYYVDSTDHKGEGIKHVNCVIHMSPASVTRDADYQK
WMRMFGITQHIMAGHEIKNMEIPILKASARISSRLNYLCPPFFPAPGFWSLNNINFFPHP
NGSCEEPSPDSGNQVSAENLLKFHLRPYAQLGLDRSAIPSLLNHKDIVDELLSEIPEIVD
ISKYLRQFWTAESKSAMCKKAENITMVEEPWINEALCSPNSKLELLGSKEHLNATEKNSD
IPPCLENITREDMEFILLGTGSSQPSKYRNVSSIFVNLFSKGGLLLDCGEGTLAQLKRRF
GVEGADSAVKDLRFIWISHIHADHHTGLARILALRSRLLKDVPHEPLLVIGPRPLKRFLD
AYSRLEDLDMQFLDCRHTTEASLDPQKDNHKPLQATLFAKGSRMESYWNRPGSPVDTAVV
LPLVMRLKSILHDAGLEALYSVPVIHCPQAFGVVLKAAERKNNTGKAIPGWKLVYSGDTR
PCQSLIDASSGATVLIHEATFEDGMDEEAITKNHSTTKEAIAVGASAGAYRVVLTHFSQR
YPKVPVFDEVHMDRTCIAFDLMSVNAADLHVLPKVLPYLKVLFRNEMSIDESDEVLDVAV
QQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgctccacatctcaagcctcaagcttctatcctcaacccctctcctcaaactccccttc
tcctctccctcttctctcttcttcaaccctaaaaccccatcaaaactccatcactcccac
ttcacagtcctctcctattacagtcgcagggacaggaggaaaggacgagggggctctgcc
cctcagagaagagggaggagcactattacagaggtcgagatggaggagaagaaggaagcg
atggggggattcaataagaggagggcggaggggagagatgcaggggggaagcggaggaat
ttgcagcagaaggttcagagattgaatccagttagcactatctgttacgttcagataatg
ccacaaattagcctatttctgttagaaattgctggtgttcaggattttgtgcccccttct
tgtgccttgagctcatcctggatctgcgcagcattactgaagttatatcagctcgcacac
tattacttttgcaggctaggtttgcagcggttctgcactgagcacaagatcaagttatcg
aagattgatcacatattcctaactcgtgtatgctcagagacagcaggcggacttccaggt
cttctattgactttagccggaattggggaagaagggatgtctgttaacatgtgggggccg
tctgatcttaaatatttggttgatgcaatgaaatcatttattccacatgctgccatggtt
tgcgcgcacagctttggagagacccaagataaaagtgaggttgctgtttcatttcctgat
accggcaggatcacagatcccattgttctcattgatgacgaggtggtgcgactgtcagct
attccactaagaccatcccaatctaataatggttctacactaaagcctggtgatattgca
gttgtctatgtctgtgaattgccagaaattaaggggaagtttgacccagttaaagcttca
tctctaggactgaaaccaggtccaaaatatcgcgaactgcaacttggaaagtcagtaatg
tcagattatcaagacattatggttcaaccaagtgatgttcttggtccttcagtgcctggt
ccaatcgtgcttattgttgactgcccaacctcagaccatatgctggaattgttttctctg
cagtctcttgaatgttactatgttgactctactgatcacaaaggggagggcattaaacat
gtgaattgtgtaattcacatgagtcccgcttctgtaacgagggatgcagattatcaaaag
tggatgagaatgtttggcatcacgcagcacatcatggcaggccatgaaattaaaaacatg
gaaatccctattctcaaagctagtgcaagaatttcatcaagactgaactatctatgccct
ccgttctttcctgctccaggattttggtctcttaacaatatcaatttctttccacatccc
aatggttcttgtgaggaaccttctccagattctggtaatcaggtttcagctgaaaatctt
ctaaagtttcatctgcgcccctatgctcaactgggcttggaccgctctgctattccaagc
ttgttaaatcacaaagacattgttgatgaacttctttcagaaattcctgaaatagttgat
atttcaaaatatctccgtcaattttggactgcagagagtaaatctgcaatgtgtaaaaaa
gctgaaaatataactatggtggaagaaccatggataaatgaagctctatgcagtcctaat
tcaaaacttgaactgctaggatctaaagaacatttaaatgcaaccgaaaagaattctgat
atcccgccttgtttggagaatataacaagagaggacatggaatttattctcctaggtaca
ggttcatcacaaccatccaaataccgcaatgtcagttctatcttcgtcaatcttttctcg
aaaggaggtttacttctagactgtggagaaggaactttagcacaattgaaaagaagattt
ggagtggagggtgctgacagtgcggttaaagatttaagatttatttggatttctcacatt
catgctgatcatcacactggtctcgccagaatacttgcattaaggtcgcggttgctgaag
gatgtgcctcatgaacctttgcttgtgattgggccgagaccattgaagagatttttagat
gcttactctagacttgaagatttggatatgcaattcttggattgtaggcatacaactgaa
gctagcctggatcctcaaaaggataatcataaacctttgcaagctacattatttgctaaa
ggcagtagaatggaaagttattggaacaggcctgggagcccagttgatactgcagtcgtt
ctaccacttgtaatgagattgaaatcaattctacatgatgcgggtttagaagctctatat
agtgtccctgttatacattgccctcaggcatttggtgttgtcctgaaggctgctgagaga
aaaaataacactggaaaagctataccaggttggaagcttgtctattccggtgatactaga
ccttgtcaatctctgatagatgcatcttctggtgcaacagttcttatacatgaggcaaca
ttcgaggatggcatggacgaggaagcaataacgaagaatcatagcacaacgaaggaagct
atagcggtgggtgcatcagcaggtgcatatcgggttgtactcacccattttagtcagagg
tacccgaaagttcccgtatttgatgaggtccacatggatagaacatgtattgcttttgat
ctaatgagcgtcaatgcagcagacttgcatgttcttccaaaggttcttccgtaccttaaa
gttcttttcagaaatgaaatgagtatcgatgaatctgacgaagtgttagatgtcgcagtg
caacaataa
DBGET
integrated database retrieval system
