Asparagus officinalis (garden asparagus): 109846322
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Entry
109846322 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4-like
KO
K10609
cullin 4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109846322
09124 Replication and repair
03420 Nucleotide excision repair
109846322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109846322
03400 DNA repair and recombination proteins [BR:
aof03400
]
109846322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109846322
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
109846322
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109846322
TCR (transcription coupled repair) factors
Cul4-CSA complex
109846322
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109846322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
109846322
NCBI-ProteinID:
XP_020271138
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All DBs
Position
6:complement(72992939..73020213)
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AA seq
818 aa
AA seq
DB search
MTHAKRSSNPISSPTSSSSPSMKKARAQHAAGAAVGDDDDPMLVDQAGASAAIATGVASN
LSRKKAIPPQPTVKKALKIKLNKDKPKLPPNFEEDTWATLKSAITAIFLKKPDPCDSEKL
YQAVNDLCIHKMGGNLYQHIQSECEVHISSALLSLVGQSPDLVVFLSLVEKCWQDFSDQM
LIIRSIALYLDRTYVKQNSGVDSLWEMGLKLFEKHLSNNKEVLHKIVTGLLRLIERERLG
EAINKALLNHLLKMFTALGIYVEKFEKPFLESTSEFYAAEGVKYMQQSDVPEYLKHVELR
LHEEHERCLLYLDASTRKPLIATAEKQLLERHTASILDKGFTMLMEAKRIEDLERMYTLF
QRVNALELLKQALGSYIRGTGQGIVMDEEKDKDLVACLLEFKMSLDMTWEESFFRNESFS
QTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGVLDKVLVLFRFIQGKD
VFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINDS
FKQSSQARTKLPTGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRR
LMWQNSLGHCVLKANFPKGKKELAVSLFQTVVLMLFNDTQKLSFQDIKESTSVEDKELRR
TLQSLACGKVRVLQKFPKGKEVEDEDSFVFNDEFSAPLYRIKVNAIQMKETVEENTSTMS
VSGRIHVWKNTGISLLSALAKIHECHFFSWSCYQVDAAIVRIMKTRKVLSHTLLITELFQ
QLKFPIKPVDLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgactcacgcgaagcgctctagtaaccctatctcatccccgacgagctcctcatcccca
tcgatgaagaaggccagggctcagcacgcggccggggcggccgtcggcgacgacgacgac
ccgatgctcgtcgatcaggccggtgcctcggcggcgatcgcaactggggtagcttccaat
ctctcgaggaagaaggctattccgcctcagccaactgtgaagaaggcactcaagattaag
ctcaataaagataagcccaagttgcctccaaacttcgaagaagatacttgggcaacacta
aagtctgctatcacagctatattcttgaagaagccagatccctgtgactctgagaagctt
tatcaggctgtcaatgatctttgtattcataagatgggaggaaacctttaccaacacatt
caatcggaatgtgaagtacacatctcctcagcacttctgtcattggtaggccagagcccg
gatttggtggtgtttctatcgctggtagagaaatgctggcaggatttctcagaccagatg
ttgattattcgtagcatagccttataccttgatagaacatatgtgaaacaaaacagtggc
gttgattcactgtgggaaatggggttgaagctgtttgaaaagcatctctccaacaataaa
gaagtgttgcacaaaattgttacaggccttctgagattaattgagagggagaggttgggt
gaagctattaacaaggcactacttaatcaccttttgaagatgtttactgctctaggaatt
tatgtggagaaatttgagaaaccatttcttgaaagcacttctgaattttatgctgcagaa
ggtgtgaaatacatgcagcagtcagatgttccagagtatttgaaacatgtagagttaagg
ttgcatgaagagcatgaaagatgcttgctctacttggatgctagtacaaggaagccactt
atagcaacagctgaaaagcaacttcttgaacgccacacagcttccattcttgataaggga
ttcacaatgcttatggaagctaaacgtattgaagatctcgagagaatgtatactcttttc
cagagagttaatgctcttgaattactaaagcaagcgttgggctcgtacattcgtggtact
gggcaaggtattgtcatggatgaagaaaaagataaagatttggttgcatgcctcttggaa
ttcaagatgtcccttgatatgacatgggaagagagtttcttcagaaatgaatcattttca
caaaccataaaggattcatttgagcacctgattaatcttcgacagaatagacctgctgag
ctaattgcaaagtttctggatgagaagcttcgtgctggcaacaagggtacttctgaagaa
gagttggaaggtgtacttgacaaagtattggtattattcagatttatacagggcaaagat
gtttttgaggcattctacaagaaggatcttgccaaaaggttattgttaggaaagagcgcc
tcaattgatgctgaaaagtcaatgatctcgaaactcaagaccgagtgtggcagccaattt
actaataaacttgaaggaatgttcaaggacattgaattatcaaaagaaataaatgattcc
ttcaaacaatcatcccaagccagaacaaagcttcctaccggtatcgagatgagtgttcat
gttctcacaactggatactggccaacgtacccacccatggatgttcggcttcctcatgaa
ttgaatgtttatcaggatatatttaaggagttctacttaagtaagtatagcgggagacgg
ttaatgtggcagaattcattaggtcactgtgttctgaaagcaaactttcctaaaggtaaa
aaggaattggcagtgtcattgttccagactgttgtcttgatgctgttcaatgatacccaa
aagcttagttttcaagacatcaaggagtccactagtgttgaagataaagagctaaggagg
actttgcagtcacttgcatgtggaaaagttcgtgtgctccaaaagttcccaaaaggaaaa
gaagtagaggatgaagattcatttgtgttcaatgatgagttcagcgctcctctctaccgt
atcaaggtaaatgcaattcagatgaaggagacagtagaagaaaacacaagcaccatgtca
gtatcaggcaggattcatgtttggaaaaatactggaatatcactgctttccgctttggcc
aaaatacatgaatgccacttcttttcgtggagttgctatcaagttgatgcagctattgtg
cgaataatgaagacaaggaaagtactcagccacacacttttaataactgagctcttccag
cagctcaaatttccaataaagccggtagacctgaagaaaagaatagagagccttattgat
agagaatacctagagagagacaaaagcaacccacagatatacaactatttggcataa
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