Asparagus officinalis (garden asparagus): 109846323
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Entry
109846323 CDS
T05243
Name
(RefSeq) Fanconi anemia group D2 protein homolog
KO
K10891
fanconi anemia group D2 protein
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109846323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109846323
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
109846323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
DUF7224
Motif
Other DBs
NCBI-GeneID:
109846323
NCBI-ProteinID:
XP_020271139
LinkDB
All DBs
Position
6
Genome browser
AA seq
1423 aa
AA seq
DB search
HKLRRSLETRFSSDPSILSRFVSGFSSYIQNPQNLKRVLIPASISGGSAKGESLVRLLLL
VGPIQAQIQQILLEKLPEHFDSPPSLNLTDDVARLVINQFRWLDFIVDSVGFTEKLMEVL
SISPLQLKKEIIGSLPEIIGDQNSSTVVAALEKLLQEDSEVIVPVLDSFSNLNLDDQLQE
QAVTIALSCIRTVDAEHMPHLLRFLLLSATPANVGRIILRIREQLKFVGVSDPCVSKHKK
LKGKSLANSTEASILDALRSSLRFKNILCEAILKELKSLNQPRDHKVIDVWFLILIYTNG
GSLQKHAEKMLKKKIMDGCFRETLFDQCIYGQRELVKDYFPSFLSVCECLLSCKDKEARD
FGIYLYKLLFEEFSDTYPRQEILGALVTHIGSAIAFEVSSALDTLNLLTSKYSEELLPLS
SHINGILDYLEGFHEESLHKVYEIFCRLALSARSCPDSNSSSIANELLMIIRKQVSNSDM
KYRKMGIIGTLKIVSTLGDINAAATFSSSQKSNCQEALELLKMSLDSCEKTTLLLILLHD
ELIVLLECKTFQPAIIEWIGKHVGEFESLFLCDLEEGTLPLKDTSSGIKGDLWMNLDGDL
SPICLNILPLLSAPSQMCSSSLQILPCEFLLLSAIERLTNQGSLGGIDALLGCPLHLPSP
KYLIGGHWKNLMGLQKQIVCFSLHFAINWTRELLNAFITQVVGRVDCITQTTRNETMIKL
LKRLRNLVLMECLLNACLQDYPLSLPELHNFTKPPDSFLRANRSMQREKRSSERMVSEST
SQDNKRRCKKDPETSQKSNPNEKLRQPTIISAFKRAGVVISQEVNESSSGQSSNGGTSQS
IKNQDTDSTEAGPIDISAELKVLDMQRFKFRPLNIECFSMLSFSEGRDSCCSDPAAELPL
HLYLLRDFHNKLDYLSPPSKQFPAICSVKASPGYCRVTTSEFLSKIRPLFPSIKKHLYCA
FSVLRDGVETCEEHWTAQSTAAGNPDIPNLVFSKASAATFVFKEVLCCYSKMLSLPELYL
QTNQPILRDMLEAFQPIEKPDNFVSGLNPLPTVGNLDYLYCGVYSSLEEVLETACSFSFL
LAAEVLFTMQSLVNSIALLLEKSTDVNGKNMYGGSFQRILPFLRSKLGLSAHKLLGNNWV
GEDNEIGGKNKGDIVQKILQIYLKNSESTSDLLDELACSVLPQVPSCKTENTQAAAHGFP
TLCPTMFLTWCRVLHEENLEILNKLVKGVILKSRGNIQREAAKDVLIKLLQSVNIVVSLV
NLCKVHDKVAMHAMAVKYGGKFVGTLLKAFNFLEVHFQAHNDIIIQLVKELQKATRIIQA
LCSEAKGLKRTMVTSKIPATKRSMERFLFHVKALLHSTSNGCTFWMGNLKHKDLYGQVVS
SQVYANAEDETMVGGGEGEAAAAHMDGEHEEQENESAREDNVG
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
cacaagctccggcgaagcctcgagactcgattctcctccgacccctcgatcctctctcga
ttcgtctccggcttcagttcctacatccaaaaccctcaaaacctaaagagggttttgatt
ccggcctcgatcagtggtggatcggcgaaaggggagagcctggtgcggttactgctcctt
gtcggtcccatccaagcgcagatccagcagatattgcttgagaaacttccagaacacttt
gattctccaccatctctcaacctgaccgatgacgtggccaggcttgtcattaatcagttc
cggtggctggactttatcgtggattctgtaggtttcactgagaagctgatggaggttctt
tcaatctctccacttcagctgaaaaaggagatcattgggtctcttccggagattattggt
gatcagaatagtagtacagtggttgctgctctggagaagctgctgcaagaggattctgag
gttattgtgccagtgctcgattcgttctctaatcttaacttggatgatcagctccaagaa
caggctgtgacgatagcattatcatgtattagaacagttgatgcagagcacatgccccat
ttgcttagatttctgctcttatcagcgactcctgcaaatgttgggaggataattctacga
atacgtgagcagttgaaattcgtgggagtgagtgatccttgtgtttccaagcacaaaaaa
ttaaaaggaaaatcattggccaatagtaccgaggcttctatccttgatgctttaagatcg
agcctccggtttaagaatattctatgtgaagctatcttaaaagaactgaagtccctcaac
caaccacgtgatcacaaagtcattgacgtgtggtttctaattctaatatatacaaacgga
ggctccctgcagaagcatgcagagaaaatgttgaagaagaaaataatggatggttgtttt
cgtgaaactctctttgatcaatgtatttatggccagcgggaattagtaaaggattatttt
ccatcatttctctctgtctgtgagtgcctattatcatgcaaagataaagaagcacgagat
tttggtatttacctctacaagttgctgtttgaagaattcagtgatacctatccaaggcaa
gaaatccttggtgcgctagtcacacatattggttctgcgattgcttttgaagtcagttct
gctttggatactttaaatcttttgacatcaaagtattcagaggagctactcccactctct
tctcacataaatggaatcttggactacttggaaggtttccacgaagaaagtctgcacaag
gtatatgaaatcttctgccgtttggcattgtctgctcgctcttgtcctgattccaacagt
tcttccattgcaaatgaactattgatgatcattaggaagcaggtcagcaattcagatatg
aaatacagaaagatggggataattggaactttaaagatagtgtccacacttggggatata
aatgctgctgctactttctcatcgtctcagaaatcaaattgtcaagaggctttggagcta
ttgaaaatgtctttagactcttgcgagaaaacgacattgctgttgatactactacatgat
gaactgattgttttattggaatgcaagacttttcagcctgcgattatcgaatggattggt
aagcatgtcggtgaatttgagtcactgtttttgtgtgatcttgaggaaggaacactgccc
ttgaaggacacatctagtggtataaaaggggacttgtggatgaacttggatggtgatctt
tctcctatctgcttgaatatcctgccgttactttctgctccttcgcagatgtgttcttcc
tcattacagattcttccttgcgaatttttattattatctgctattgaaagattaacaaat
caaggttctcttggtggaattgatgcgcttctcggctgtcctttacaccttccatctcct
aagtatttaatcggaggccactggaagaatctgatgggactgcagaaacagatagtttgc
ttttcactccattttgcaataaactggacaagagaattgcttaatgcatttataactcaa
gtcgttggcagagttgattgcataactcagactactagaaatgagacaatgataaaacta
ttgaagcgtctgagaaatctagttttaatggagtgtttgctcaatgcatgcctccaggat
tatcctctctctcttcctgagctccacaatttcacgaaacctccggactcttttctcagg
gctaatcgctcaatgcaaagggaaaagaggagcagtgaaagaatggtgtctgagagtact
tcccaggacaacaagaggagatgcaaaaaagatcctgagacctcacaaaaatcaaatcct
aatgaaaagctaaggcaacctactataatcagcgcatttaaacgagcaggagtagttata
agccaggaagtcaatgagagttcgtcagggcaatcatctaacggagggacatcacagagc
attaaaaatcaggatactgactcaactgaggctgggcctattgatatatcagcagaactt
aaagtcctcgacatgcaacggtttaagttcaggcctctaaacattgagtgcttttcaatg
ttgtccttttcggagggtcgtgattcctgttgttcagatcctgcagctgagctcccgttg
catctttatcttctccgtgatttccacaacaagctggattacttgagtcctccaagcaaa
caatttccagctatatgctcggtgaaggcctcgcctgggtactgtagagtgacaacatct
gagtttctgagcaagattagacctttatttccaagcataaagaaacatctatattgtgca
ttttctgttcttagggatggagttgaaacctgtgaggagcattggacagctcagtcgact
gctgctggaaatccagatataccaaatctggtcttttcaaaagcttcagctgctactttt
gtctttaaagaagttctatgctgctatagtaagatgctaagccttccggaactatatctt
cagacaaaccaaccaattctcagggatatgctggaagcattccagccaatcgagaagcct
gacaactttgtttcagggctgaacccacttccaacagttgggaacctggattacttgtac
tgtggcgtatattcatcgcttgaagaggtactggaaacagcgtgctcgttctcatttttg
ctagcagcggaagtattattcaccatgcaatcgcttgtcaactcaattgcattgttgctt
gaaaaatctactgatgtaaatgggaaaaacatgtatgggggatccttccagagaatctta
ccttttctgagaagcaagcttggtttgtctgcccacaaactacttgggaataattgggtt
ggtgaggacaatgagatcggaggaaaaaataagggtgacatagtacagaagatactccaa
atatatctgaaaaacagtgaatctacatctgatctccttgatgagctagcatgctcagta
ttgcctcaggtgccttcatgcaaaactgagaacacccaagctgctgcccatggatttcca
acactatgtcctaccatgtttcttacatggtgtcgggtattgcatgaagagaaccttgaa
attttaaacaagttggtcaagggagttattttgaaatctagaggaaatatccaaagggaa
gctgcaaaagatgtcctgataaaacttcttcagtcagtgaacatagttgtatctttggtg
aatctgtgcaaggttcatgacaaggtagctatgcatgctatggcagtcaaatacggcggc
aagtttgttggtactctcttaaaagctttcaacttcctagaagtccatttccaggctcat
aatgacattatcatccaattggtcaaagagctccaaaaggcaacaagaatcatacaagcc
ctttgttctgaggctaagggtttgaaacgaacaatggtcaccagcaagatccctgcaact
aaaagatcgatggaacgattcttattccacgttaaggctcttcttcatagcacatcaaat
ggatgtacattttggatgggtaatttgaaacataaagatttgtatggccaagtagtgagc
tcgcaagtgtatgctaatgcagaagacgaaacaatggtaggaggaggagaaggagaagca
gcagcagctcacatggatggggaacatgaggaacaagaaaatgaatctgctcgagaagat
aatgtaggctga
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integrated database retrieval system
