Asparagus officinalis (garden asparagus): 109846500
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Entry
109846500 CDS
T05243
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109846500
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
109846500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
109846500
NCBI-ProteinID:
XP_020271355
LinkDB
All DBs
Position
6:complement(10145709..10164922)
Genome browser
AA seq
1586 aa
AA seq
DB search
MDQNQRASRSHQLPTAKAAIVDLFNLYLGRSSRQRSDDPLKETSNKMQKRVTAPVGELPP
RNEQFLLDFQQLQAQFQDQEQLRSATESVLTSFVVQCSGHGPQSEFILFALRSLFSIGYV
KWDTFLPSLLSMVSSAESSVGPGSPTIAGPMITSPSSSSALPNASSFQTSNPTSPLPSMH
GIGSPAQSVTDQSISTTLSPVKPSDHVASRANQLVKVTAVSSLRQLVCKIVLASFESNLK
PATAFEVFSNVVTWLVNWDQKQQGCDDADTVRVWKPERPLHEWMHICLDVIWRLVEEDKY
CIPFYELIRSALQYMDNIPDDEALFSIILEIHRRRDLVATHMQMLDQHLHCPTFATHRFL
SQSYPNISGESITNLRYSPITYPSVLGEPLHGEDLATSIQKGSLDWERALRCLRHALRST
PSPEWWRRVLLVAPCYKPPQAPYPGAVFSPEMICEAALDRTMDLLKMTNSETQCWQDWLI
FSDLFFFLMKSGCIDFLDFVHKLSSRVNMGNQQVLRSNHVTWLLAQIIRIEIVTSTLNSD
PKKVETTRKLISFHREDKNTDGNNVSPQSILLDFISSSQTLRIWSFNSSIREYLNSEQLQ
KGKQIDEWWKQATKGERTMDFMNLDDRSMGMFWVLSFTMAQPACAAVMNWFTSAGVTEIH
QGPNVQTNDRMMMMRETCPLSVSLLSGLSVNLCLKLAYQLEEVIFLGQVIPSIAMVETYV
RLLLISPHSLFRPHFTTLISRSASLFSKTNVLILLLEILNYRLLPIYRYHGKHKALMYDV
TKIISMLKGKRGDHRAFRLAENLCMNLLLSLRDFFMVKKELKGPTEFTETINRITIISLA
ITIKTRGIAEVEHMLYLQPLLDQIIVTSQHTWSDKTVRYFPQLIRDALVGRQDKRIQAIQ
AWQQAETTVINQCTQLLSPSADPTYVMTYLSHSFPQHRQYLCAGAWTLMNGHPESINSAN
LGRVLREFSPEEVTSNLYTMVDVLLHQIQIEQQRGHIVKDLQSKVIANLAFFIWTHELLP
LDILLLALIDRDDDPYALRIVISLLDRAELQQRISLFCANRSSPEYWLNDQVPKRVDLQK
ALGNHLSWKERHPPFFDDIAARLIPVIPLIIYRLIENDATDIADRVLALYNSILAFHPFR
FTFVRDILAYFYGHLPSNLIVRIIKVLDISKIPLSESFPQYLNPSNPATPSTDYYASLLL
RLVNDVIPPLCGKSKSETTGDPSGNSLRPTYSKSQASSQSGGNNSSDGQRTFYQNQDPGT
YTQVVLETAVIEILSLPVTSSQIVSSLVQIVVHVQPSLIQSNNGSCGIGQNPGLPTSPSG
ASTESFGTNRATPSAPGVLAANFVSKSGYSCQQLSCLMIQACGLLLAHLPQEFHMQLYCE
ASRIIKDCWWLSDPKRSMKELDSAVGYALLDPTWASQDNTSTAIGNIVALLHAFFSNLPH
EWLESTHTVIKHLRPITSVAMMRIAFRIMGPLLPRLAFARPLFMKTLALLFNVLADVFGK
NSQPSTATEASEITDIIDFLHHAVMYEGQGGPVQSTSKPRIECLTLCGRMVDLLRPDVAH
LFMHLTTDPSSSIYAATHPKLVPNPT
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagagggcttcaaggtcccaccagctgcccactgctaaggctgccata
gttgatctcttcaacctctatcttggaagaagttcccgtcagagatctgacgacccatta
aaggaaacttcgaacaagatgcagaagagagtgactgctcctgttggggagctaccccct
cgaaatgagcagttccttttagattttcagcagttgcaagcacagtttcaagatcaagag
caactccgttctgcaacagaatcggtccttacatcctttgttgttcaatgtagcggccat
ggaccacaatcggaatttattctatttgcgttgaggagtttgtttagcataggttatgtc
aagtgggatactttccttccttcactcctttctatggtttcttctgctgagtcatccgtt
ggccctggtagtccaacaattgcagggccaatgattacatctccatcatcttcatctgct
cttccaaatgcttcaagtttccaaacttctaatcctacatcccccttgccatcaatgcat
ggtattggctctcctgctcaatctgttactgatcaatctatttccacaactctctcacca
gttaagccatctgatcatgttgcctcacgggctaatcagttggttaaagttactgctgta
agtagtctacgccagctagtgtgcaagattgttttagcttcattcgaatccaatcttaaa
ccggctactgcttttgaggttttctctaatgtggtaacttggctggtaaattgggatcaa
aagcagcagggctgtgacgatgctgatactgtgagagtttggaagcctgagaggccattg
catgaatggatgcatatttgcttggatgttatatggaggttggttgaggaagataaatac
tgcattcccttctatgagttgattcgtagtgcgttgcagtatatggataatattcctgat
gacgaagcactgtttagcatcatcctggagattcataggaggagagatttggtggctact
cacatgcaaatgttggatcagcaccttcactgccctacttttgctacccatcggttcttg
tcacaatcctacccaaatatatctggcgaatcaataacaaatttgcgttattcacccata
acttatcctagtgttttaggagaaccgttgcatggagaggatcttgcaacatctatccag
aaagggagcttagattgggagcgggctttacgttgtctaagacatgctcttcgtagtact
ccatctcctgagtggtggcggcgtgtccttcttgttgctccttgctataaacctcctcaa
gcaccataccctggtgctgttttctctcctgaaatgatttgtgaggctgctcttgacagg
acaatggatcttttgaaaatgacaaattcagaaacacaatgctggcaagattggcttata
ttttcggacttgttctttttcctcatgaaaagtggatgtatcgactttcttgattttgtt
cacaaactctcctcccgcgtcaatatgggtaatcaacaagtattacggagtaatcatgtg
acatggcttcttgcacagatcattcgtattgagattgtgacgagcaccttaaactcagac
ccaaagaaggttgaaactaccagaaaactcatttcctttcatagggaagacaaaaatacg
gatggaaataatgtcagtcctcaaagtattctcctggattttataagtagcagccaaaca
ttgcgaatttggtctttcaactcatcaattagagagtatctgaatagtgaacagcttcag
aaaggaaagcaaatagatgaatggtggaagcaagcgactaaaggagagaggacaatggat
ttcatgaacttagatgataggtcgatgggtatgttctgggttctctcatttaccatggca
caaccagcttgtgcagcagttatgaactggtttacctcagctggagttacagaaatccat
caagggccaaatgtgcagaccaatgatagaatgatgatgatgcgtgaaacttgcccactt
tctgtgtccttactttctggattatcagtcaacttatgtttgaaacttgcctatcaactt
gaagaagtaatatttcttgggcaggttattcctagcattgcaatggttgaaacgtatgtt
cggttgctgttgatctcacctcactcattatttcgtccacatttcacgacactgatctca
agatctgcatcgctgttcagcaaaacaaatgttttgatattgctcttagaaatattgaac
taccgattacttcctatatacaggtaccatgggaaacataaggcattgatgtatgatgtt
accaaaattatttctatgcttaagggtaaacgtggagatcatcgtgcttttagattggct
gaaaacttatgcatgaatcttttgttgtcattaagggatttttttatggtgaagaaggaa
ctaaagggaccaactgaattcaccgaaacaattaacagaataacaataattagccttgca
atcaccatcaaaactcgtggcattgccgaagttgagcatatgctttacctccagcctttg
ctagaccaaataatagtaaccagtcagcatacatggtcggacaagacagtgagatacttc
cctcagcttattcgagatgccttagtaggaaggcaggacaagagaattcaggctatccaa
gcatggcaacaggctgagacgacagtgattaatcagtgcactcaacttctttcaccctca
gctgatccgacttatgttatgacttatcttagccatagttttccgcaacatcgccaatat
ctgtgtgctggtgcttggacgcttatgaatgggcatcctgagagcattaatagtgcaaat
ctcgggcgtgtcttgagagaattttcacctgaagaagtgacatctaatctatacactatg
gtggatgtccttcttcatcaaattcagattgaacaacaacggggacatattgtgaaggac
cttcagtcaaaagtgattgccaaccttgcttttttcatttggacgcatgagctgcttcca
ttagatattctgcttttagctctaattgacagagacgacgatccttatgctttgcgcatt
gtgataagtttgcttgaccgagcagagcttcaacaaaggattagtctgttctgtgcaaat
cgtagttctcctgagtattggcttaatgaccaagtgccaaagagagtggatcttcaaaaa
gctcttggaaatcatctttcatggaaggaacggcatccccctttctttgatgatattgct
gcacgtctgatcccagtaattccactcattatatataggctaattgagaatgatgccact
gatattgctgacagagttcttgcactttacaattcaattctggcattccatccattcaga
tttacatttgttagggatatactggcatacttctatggtcatcttccaagcaatctcatt
gtacgaataattaaagttcttgatatttctaagattcccctctcggagtcatttcctcag
tatcttaatccatccaatcctgccactccttcaaccgactactatgcctctcttttgtta
cgtcttgtgaatgatgttatacctcctttgtgtggtaagtctaaatcagagaccacaggg
gacccttctggaaattctttacgtccaacatacagtaaatctcaagcatcatcccagtct
ggtggaaataacagttctgatggtcaaagaacattctatcaaaaccaagatcctggaaca
tacacacaagttgtcttggaaacggcagtcatagagatcctttcacttccagtaacttca
tctcaaattgtgtcatcacttgttcaaattgttgtgcatgtgcaaccatcactaattcaa
tcaaataacggatcttgtggaattggccaaaatcccgggttaccaacttctccatcaggt
gctagcactgaatcctttggtacaaatcgtgcaactccttcagcacctggagttcttgct
gctaattttgtgtcaaaaagtggatattcttgccagcaattgtcttgtttgatgattcaa
gcatgtggccttttgttagcacaccttccacaagaatttcacatgcagctctattgtgag
gcatcacgaataataaaagattgttggtggctcagtgatcctaaaaggtcaatgaaggaa
ctggactctgctgttggctatgcgttgctggatccaacatgggcctctcaagataataca
tcaactgccataggtaatattgttgccctcttgcatgccttctttagtaatcttcctcat
gagtggcttgaatcaacgcatacagtcatcaagcatcttcgtccaataacttcagttgca
atgatgagaatagccttccgcataatgggcccattgctaccccgtttggcctttgcccga
ccgctctttatgaagacattagcactgctcttcaatgtgttggcggatgtatttggaaag
aactcgcaaccctcaacggctaccgaggcatcagaaataacagatattattgatttctta
catcatgctgtgatgtacgaaggacaaggaggtcctgtacagagcacgagtaagccaaga
atcgagtgcctgactctttgtggaagaatggttgatctccttcggccagatgttgcacat
ctttttatgcatttaactacagatccaagctcttctatatatgcagccacacatcctaaa
ctggtgccaaatccaacctaa
DBGET
integrated database retrieval system
