Asparagus officinalis (garden asparagus): 109846508
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Entry
109846508 CDS
T05243
Name
(RefSeq) DNA topoisomerase 6 subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109846508
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
109846508
DNA replication proteins [BR:
aof03032
]
Prokaryotic type
DNA Topoisomerases
109846508
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
CLU
Motif
Other DBs
NCBI-GeneID:
109846508
NCBI-ProteinID:
XP_020271372
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All DBs
Position
1:3199182..3206362
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AA seq
672 aa
AA seq
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MDFNGSSGSPEEPKKGRSKAPKKTKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRE
LVENSLDSAESISELPVIEITIEEISKSKFNTMIGLIDRERVDEELYDDFESAKAREKRL
AKEARNQEIQAKNAALGKKLKEPASSKGAKGRGEASFFRVTCKDNGRGMPYDDIPNMFGR
VLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEIASSMKGQNYISFCRLDIDIHRNI
PHVHLHEKRENKSEWHGAEIQVIIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFISDMA
DKNVTIRFARRTDVMPPVPLETKHHPSAVDLLLIKRLIAETSKQNLLQFLQHEFVKIGKA
YAERLIEEMGPDFSPKMTVKNLSSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGII
KELQPDMVATYAGSPQVFEGHPFIVEAGISLGGKDVKQGLNIFRFANRIPLLFEQGADVV
TRTALKRINWNNYKINQVQDKIGVFVSIVSTKIPFKGTGKEYIGDDITEIASAVKSAIQQ
CCNQLKSKIVKKLQDRERQDRKRNLTRYIPDASRAVMDVLNEMAGHESKRQRYRGEDAEL
VRKIASQDLTEVTFRENLAQYVEQVDYEMALEYATQSGVNDEPREDIYLNALESSEKSMD
FHSPVFVFRLIL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatggcagcagcgggagcccggaggagccaaagaaaggccgatcgaaggcg
cccaaaaagaccaaggagagcgtgctaaagcaaaaatccccggcggagttcttcgccgag
aacaaaaacattgctggattcgataatcctggaaaatctctgtacacaacagttcgagag
cttgttgaaaattctctggattcagcagagtctatttccgaactcccagtcattgaaata
acaatagaggagataagtaaaagcaagttcaatacaatgataggtctcatcgatcgggag
cgcgttgatgaagaactgtatgatgactttgagtcagctaaggctcgtgagaaacggctt
gctaaagaagcccgcaatcaagaaattcaagctaagaatgctgcccttggtaagaagctc
aaagagccagcatcatcaaagggagcaaaaggaagaggtgaagcatcattcttcagggtt
acctgcaaggataatgggagaggaatgccatatgatgacattcccaatatgtttggaaga
gttctatccggcacaaagtatggattgaagcaaactcgtgggaaatttggacttggtgcc
aaaatggcgctgatctggtccaagatgagcaccgggctaccgattgagattgcttcatcc
atgaagggccaaaattacatttcattttgtcgtcttgatatagatattcatcgaaacatt
cctcatgttcatttgcatgagaaaagagaaaataaaagtgagtggcatggtgcagaaatc
caagttattattgagggtaattggacgacatatcgatcaaagatactacattatatgcgc
cagatggctgttatcacaccttatgcacagttcctctttaaattcatttcagacatggca
gacaaaaatgtgaccatacgatttgcacgaagaacagatgtgatgcctccagttccgctt
gagacaaagcaccatccttctgctgttgatttgctcctcattaaacgcctaattgcagaa
acttcaaagcaaaatcttctgcagtttcttcagcatgaatttgtgaaaattggcaaagcc
tatgccgaacgattaatcgaggagatgggcccagattttagtcctaagatgactgtgaaa
aatctttcatcccagcaaattgttagaattcatcagttatttcggcaggctaaattcgat
gaccccagcggcgattgtcttagtcctgcaggcgaatacaatttgcgactaggaataata
aaggagctgcagccggacatggttgcaacttatgcaggaagccctcaagtttttgaaggc
catccatttattgttgaagctggaattagcttgggaggaaaagatgttaaacagggctta
aatattttccgcttcgcaaatcggatacctcttctttttgaacaaggggctgatgttgta
acaaggactgccttaaaaaggatcaactggaacaactacaagattaatcaggtccaagat
aaaattggggtgtttgtcagcattgtaagcacaaaaatacccttcaaagggactgggaag
gaatatattggggatgatataactgaaattgcatcagctgtcaagtcagctatccaacag
tgctgtaaccaactaaagtccaagatagtgaagaaacttcaagatcgtgagcggcaggac
agaaagcggaatctaaccagatatatccctgatgcatcaagggcagtaatggacgttctg
aatgagatggctggccatgagtcaaagcgacagcgttaccgtggagaggatgctgaattg
gtaaggaaaatagcatctcaggacttaactgaagtgacctttagggaaaatcttgctcag
tatgttgaacaggtggattacgagatggcattagagtatgcaacgcagagcggagtgaat
gatgaaccaagagaagatatttatctgaatgccttggaaagctcggaaaaatccatggac
ttccacagtcctgtatttgttttcaggctcattttatag
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