Asparagus officinalis (garden asparagus): 109846737
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Entry
109846737 CDS
T05243
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03440
Homologous recombination
aof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109846737
03460 Fanconi anemia pathway
109846737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109846737
03036 Chromosome and associated proteins [BR:
aof03036
]
109846737
03400 DNA repair and recombination proteins [BR:
aof03400
]
109846737
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109846737
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109846737
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109846737
FA (Fanconi anemia) pathway
Downstream FA components
109846737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
109846737
NCBI-ProteinID:
XP_020271573
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All DBs
Position
7:complement(15874637..15901638)
Genome browser
AA seq
1312 aa
AA seq
DB search
MPPPTWQIFPTADGHFRWSLAGGELDPPPSETPKTLVSRFPSLADLVRQAPPKLLELGAG
GDRTGGAPMFRTGSGRSVSVRETSVQSAKSFLEGGNAVDRGADLAVGGGSGNDNGFPMFQ
TGSGKSVAVRQASVIKAAAVLGEDTEKGAAIAVEGDNGSDNGFPMFQTGSEKSVMVRQSS
VRKAAAVLGEDDMEKGAAAVVQGGNGNDNGVPMFQTGLGKSVTVRESSVLKAAAVLGEDV
EKEVLKPPCSNSSNYDVPMFQTGSGKSVLVKQSSISRALSVLQAGDDLETGSFSSGNFAD
KTCKLIGDRHHTFSNSLFQTGSGKAVNISSAGFYRANTLLGLESKDNLYTSGYFEHPVNQ
SDSNIATDGATACWNTSSSSITKYNNDAEGALSDKRNSLPISSDFYSSGSQPYKDAVQNL
MGSEVCAPDVGQPPLKFHTAGGKSLSISRDALKRARNLLGDSDGGSLQSILKDQSTLLVK
DDKVFDETSWNKENIPIACLHRNSTTRNHSAKLPSPLPKVTNQMKSFSSIATGVQDQLKL
NGFLSGRNHDNKKISHLQVSSKRVHCVAHAAVDNPVKLPDGRHSFGLGPLVDISNHIRTD
YSNMNGFGSEKKRPQRRNSISPFKRPRISRFSAPVNITISFLAADSNKPSTSEKCCPRTS
MSAHYPFKVQRKTLQEFFGGPPTKHNQVRQLPDQVQQMNPVNADMYMFSDPAGSDSIGSE
NFRNMLLHSGASPSTATKEWVANHYKWIVWKLACLERCYPAKASGKFLTMSNALEELKYR
YEREVNYGHRSAIKRILDGDSSPASMMVLCISSIYSSPSPDLNKLNNTTNAIEDEKNLYR
VDGAERNHVLKIELTDGWYSLDAVLDVLLSKQLAAGKLFIGQKLRIWGASLCGWVGPISP
FEASKTVSLLIHINGTYRAHWFDKLGFCKNHGAPLDFRCIKGAGGKVPRTLVGITRIYPV
LYKERFTDGGSIVRSERMENKVLQLYNQRRSCIVEDIMGQQHDVSTNVDDSEEGARLMAD
MSSEQLASFSTYQLKQEANRQSSMQKKIEKALEDAGLSLRDVTPFMRVRVVSLTSKCSRK
RCPPREGIITIWNPTEKQKFDLVEGQIYSVSGLMPLNFGSDILYLQGRGSSTMWKPMLST
SEKFEPFFTPRRPVLVSSLGEVPLASEFDIAAVVVHVGEVYISGCQKKQWIFVTDGSKCS
SEVTFEDLYDCLLAVSFCSPVNDNDLSGLLSQCLVGTPVSFCNLVKRARDQMNHLWVAEA
TENSTYSVCYNLPKSFHLKEAAGSDNHWSNTSSSIMQKLRERILCIVDGQRS
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgacgtggcagatattccccaccgccgacggacatttccgatggtctctc
gccggcggagaactcgatccgccgccgtcggagactccgaaaaccctagtctctcgtttt
ccgtcgctggccgatctcgtgcggcaagctcctccgaagcttctagaacttggcgccggc
ggtgatcgcaccggtggagcaccgatgttcagaacgggatctggcagatcggtctctgtg
agagagacttcggttcagagtgcgaaatcttttcttgaaggaggcaatgctgtagatcga
ggagctgatttagctgttgggggaggtagtggaaatgataacggttttccaatgttccaa
actggatcaggaaaatctgtggctgttaggcaagcttcagtcattaaggcagcagctgtt
cttggtgaagatacagagaaaggagctgctatagctgttgagggtgataatggaagtgat
aatggctttccaatgttccaaactggatctgaaaaatctgttatggttaggcaatcttca
gttagaaaggcagcagctgttcttggtgaagatgacatggagaaaggagctgctgcagtt
gttcagggtggtaatggaaatgataacggcgttccaatgtttcaaactggattgggaaaa
tctgttacggttagggaatcttcagttttgaaggcagcagctgttcttggtgaagatgtg
gagaaagaggttttgaagcctccatgttccaacagcagcaattatgatgttcctatgttc
cagactggttctgggaaatcagttttggtgaagcaatcatctattagtagggcattatct
gttcttcaagctggggatgatcttgaaacgggttcattttcatctggaaattttgcagat
aagacatgtaagttaataggtgatcggcatcacactttctctaactcgctcttccagact
ggctctgggaaagccgtaaatatatcttctgctggtttttatagagctaacactttattg
ggtttggagagcaaggacaacctctacacttcgggatatttcgagcatccagttaatcag
tctgactcgaacattgccactgatggcgccacggcttgttggaatacgagttcttctagt
attaccaaatacaataatgacgctgagggtgccctatcagataaaagaaattcactcccg
atttcatcagatttctactcatcaggaagccagccatataaagatgcagttcaaaatctt
atgggatcagaagtgtgtgcgcctgatgttggccaacctccgctcaagttccatactgct
ggtggcaagtctttatcaatttctagggatgcactaaagcgtgcaagaaatcttcttggt
gactcagacggtgggagtttacagagtattttaaaagatcaatcaacccttttagtaaaa
gatgacaaagtatttgatgaaacttcctggaataaagagaatattcccattgcttgtctg
catcggaactctactactagaaatcattcagcaaagcttccatctcctcttccaaaagtt
accaatcaaatgaagtcattttcttctatcgccacgggtgtccaagatcaactgaagctg
aatggttttctgtcaggacgaaatcatgacaacaagaaaatttctcatttgcaagtatct
tctaaaagagttcactgtgtagctcatgctgcagttgacaatccagtaaagttaccagat
ggtcgccattcatttggccttgggccattagttgatatctcgaaccacatccgtacagat
tattcaaatatgaatggttttggaagtgaaaagaaaagacctcagaggagaaactccatc
tctccatttaaaaggccacgcatttcacggttcagcgctcctgtaaacatcactatctct
ttcttagctgctgattcaaacaagccatctacttcagaaaagtgttgtcctagaactagc
atgtccgcacattatccatttaaagttcaaagaaagactcttcaagaattttttggtggt
cctccaaccaagcataaccaggtcagacaactgccagatcaagtacaacaaatgaatccc
gtcaatgcagatatgtatatgttttctgatcctgcaggttctgatagtattggatcagag
aattttagaaatatgttacttcactctggtgcctcaccatcaactgcaactaaagaatgg
gtcgcaaatcactacaagtggatagtttggaaacttgcttgcctggaaagatgctatcca
gctaaagctagcggaaagtttttaacaatgtctaatgcgcttgaggaattaaaataccga
tacgaaagagaagttaattatggccataggtcagcaattaaaagaattctggatggtgat
tcatcaccagcttctatgatggtcctatgcatttcctctatatattcaagtccttctcct
gacctgaataaattgaacaatacaactaatgcaattgaagatgaaaaaaacctttaccgc
gtagatggagctgaaagaaatcatgttttgaaaatagaactaactgatgggtggtattct
ctggatgctgttttagatgtattgttgtcaaagcagttagctgctggaaagctgttcatt
ggccagaaacttcggatatggggagctagtttgtgtggttgggtcgggcctatttcacca
tttgaggcctctaaaacagttagcttactgatacatataaacgggacatatcgagcacac
tggtttgataaattgggattctgtaaaaatcatggagctccactggattttagatgcatt
aagggcgctgggggtaaagttcccaggactttggttggaattacacgaatttatcctgtt
ttgtataaggaaagattcacagatggtggttctattgtgagatcagaaagaatggagaac
aaagtgctccagctgtataaccaaaggcggtcttgcattgtggaggatatcatgggtcag
caacatgatgtatctacaaatgttgacgatagcgaagaaggggcaagactaatggcagat
atgagctcagagcaactggcgtctttttcaacttaccagttgaagcaagaggctaacaga
caatctagcatgcaaaagaagattgagaaagctttggaagatgcaggccttagcttgagg
gatgttacaccttttatgagggtgagagtggtcagcttgaccagcaaatgctcacgtaag
aggtgccctcctagggaagggataataacaatttggaatcctactgagaagcagaaattt
gatctggtggaagggcagatatattctgtctcgggacttatgccactgaattttggttct
gatatcctttacctacaaggtcgaggatcttctacaatgtggaaacccatgctatcaaca
tccgagaaatttgaaccatttttcacccctcggagaccagtgctagtgtcaagtttgggt
gaggtgcccctagcaagtgaatttgatattgctgctgtggtcgtgcatgtgggggaggtt
tatatatctggttgccaaaaaaaacagtggatttttgtgacagatggatccaagtgcagc
tcagaagtaacatttgaagatctgtatgattgtttgcttgctgtcagcttttgctcacct
gtcaatgataatgatctttctgggctactcagccagtgccttgtagggacaccagtttcc
ttctgtaatcttgttaagcgggcaagggaccagatgaatcatctttgggtagctgaggca
acagaaaattctacatattctgtttgctataaccttccaaaaagttttcaccttaaggaa
gctgcaggctctgataaccactggtcaaacacatcttcttcgataatgcaaaagcttagg
gagaggattttatgtattgttgatggtcagcgaagctaa
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