Asparagus officinalis (garden asparagus): 109847016
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Entry
109847016 CDS
T05243
Name
(RefSeq) RNA-binding protein 28-like isoform X1
KO
K14573
nucleolar protein 4
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109847016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aof03009
]
109847016
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109847016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
109847016
NCBI-ProteinID:
XP_020271850
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All DBs
Position
1:5587940..5597927
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AA seq
1001 aa
AA seq
DB search
MGKRKRNENGGGPARGPDGGQQHCPATVFVSNLPYSFKSKELEEAFVEVGPVKRCFMVTH
QGSEVTRGFGFVQFASVEDAKRAIEVKNGSAIGGRKMRVKLAMHRLPRDQRQQKKNEVCP
EETKADKDSVVLSTGPKKHNENTQTPDPQEKNQEAPETLAATGGAHQMPQPDGVPPDKAK
GSEKQRVARTVVFGGLLSSEMAVEVFHRAGEVGTICSVSYPLPKEEIELHGLARDGCKPE
AAAVLFASVKSACRCVGLLHQQEIKNGRVWARQLGGEGSKISKWKVIVRNLPFKVKVNEI
RDIFSSAGFVWDVFIPHVSEQGLSKGFAFVSFTSKRDAENAIKNINGRVVAKRSIAVDWA
VQKKIYVAATKSTSLQDGQSVDSDKEDDVSEDDVSIEDVEDRGLGESQHPSEETYTTQKG
SAADESSMLPAEVNFEKEAEVARKVLDNLIKASTGFQPSLGGNSKKTEGTEELLNANDKV
SKEPTVPGTKSTVDTKRSEKTPEELNKSKSDLERTIFISNLPYDIGNEEVKQRFSVFGQV
EFFLPVLHPLTKRPKGTAFLRFGKTSAADVAVTAANAASGLGIVMKGRSLNVLKALDKDS
AHKKGLEKTRNEVQDRRNLYLAKEGEILADSPAAEGVSEFDMKKREVLAQKKAEMLRSPK
FHVSRTRIIIYNLPKTMSEEDVKKLCIDAVLIRASKQQPVIQMVKLLKDVKKGQAVVKKH
PRAVAFVDFKEHEHALVALRVLNNNPETFGPEYRPIVEFAVENIHKIKHRKAKLNESHGN
LEDGMKGHKKAKLDSSNENRGSLEEGMKGHRSSSQTEDANTNRSHKKKLRNMKSKKGHRE
SFKESELSSEGTKDNVEVIKEGKNARKQNISSRRNKDSSAKLKNGSVAAEQTTEKQGDQL
KKEAKFTSKKRRKPQQTKELEPKEEPIGTSNKRKFQNAGKEQQKETKNAKRRRAGASDRE
AEDKLDMLIQKYRNTFSQRSSDKSKDAASSGSREVRRWFES
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcgtaagaggaacgagaatggtggtgggcccgctcggggccccgacggaggg
cagcagcattgtcccgccaccgtgtttgtctccaacctcccctattctttcaagtccaaa
gagcttgaagaagcgttcgtcgaggtgggccctgtgaagcgctgctttatggtaacccat
caaggttcagaagtaactcgtggctttgggtttgtccaatttgcttctgtggaagatgct
aaacgtgccattgaagttaaaaatggatcagccataggtggtagaaaaatgagagtcaag
cttgcaatgcatcgccttcctagggatcaacgtcagcaaaagaaaaatgaagtgtgtccg
gaggagacgaaagcagataaagattcagttgttctatctactggtccaaagaaacacaat
gaaaatacgcagacaccagatccacaagaaaagaaccaagaggccccagaaactttagca
gcaactggtggcgctcatcaaatgccacaacctgatggtgtccctcctgataaagcaaaa
ggctcagaaaagcaaagggttgctagaacagtagtatttggtggtcttcttagttccgag
atggcagttgaagtattccatcgagctggcgaggttggcacaatatgctctgtaagttat
ccccttccaaaggaagaaattgaacttcatggtcttgctcgagatggatgcaaaccagaa
gctgcagcagtactctttgcaagtgtcaagtcagcatgtcgttgcgtaggattgttgcat
cagcaagagataaagaatgggcgtgtttgggcacgccaactcggtggggagggatctaag
ataagcaagtggaaagtaatagtcaggaatcttccgtttaaggttaaagttaatgagata
cgagatattttctcctccgcaggatttgtctgggatgtatttattccacatgtttcagaa
caagggttgtccaagggttttgcttttgtctcttttacgtccaagagggatgctgaaaat
gccataaaaaatatcaatggccgagtagttgcgaaaagatctattgccgtggattgggct
gtccagaagaaaatttatgttgctgctacaaaatctacctctttgcaagatggacaatca
gttgacagtgacaaagaggatgatgttagtgaagatgatgtgagtattgaggatgttgag
gatcgtggtctaggagaaagtcagcatccttctgaagaaacttatacaactcagaaaggg
tcagctgctgatgagagtagcatgcttcccgcagaagtaaattttgaaaaggaggcagaa
gttgcaagaaaggttctagataatctgattaaagcctcaactggatttcagccatcattg
gggggaaactcgaagaaaactgaaggcactgaagaattactgaatgcaaatgataaagta
agcaaagaacctactgttcctggaacgaagtccactgtagacaccaaaagatctgaaaaa
acacctgaagaactcaacaagagcaaaagtgatttggagaggacaatcttcataagcaac
cttccgtatgatattggtaacgaagaggtgaagcaaaggttctcagtatttgggcaagtg
gaatttttccttcctgtccttcatcccctcaccaaacgacccaaaggaactgctttctta
aggtttggtaagacatccgcagctgatgtggcagttactgcagcaaatgctgcttctggt
ttgggaattgtaatgaaggggagatcactcaatgttttgaaggctttggacaaggattcg
gctcataaaaagggccttgagaagacaagaaatgaggttcaagatcgtcgcaatttatat
ttggcaaaggaaggtgaaattctggccgactctccagcagctgaaggcgtatcagaattt
gatatgaagaagcgtgaagtgttggcccagaagaaggcagaaatgcttcgttctccaaaa
tttcatgtatcaagaactagaattattatttacaatcttcccaagacaatgtcagaagag
gatgtgaagaagctctgtatagatgctgttcttattcgtgcttcgaagcagcagcctgtt
attcaaatggtaaaactcttaaaggacgtcaaaaaaggacaggctgttgtcaagaaacac
ccacgtgctgtagcttttgttgatttcaaagaacacgagcatgcgcttgtagcccttagg
gttcttaacaataatccagaaacttttggcccagagtatcggcctattgtggaatttgct
gttgagaacatccataaaattaagcacaggaaagccaagttaaatgagagtcatggcaac
ttagaagatggaatgaaggggcacaagaaagctaagttggattcttcaaatgaaaatcgt
ggcagcttagaagaaggcatgaagggacaccgttcttcatctcaaacagaagatgctaac
acaaaccgaagtcataagaaaaagttgagaaacatgaaatctaagaaaggccatagggaa
tcttttaaagaatctgaacttagcagcgaaggaacgaaagataatgttgaggtgatcaag
gagggtaaaaatgccagaaaacagaacatttcttcaagaagaaataaagattcttcggcc
aagttaaagaatgggtcagttgcagctgaacaaaccactgaaaagcagggagatcaactg
aaaaaagaagcaaaatttacttcaaaaaagagaagaaaaccacaacaaaccaaagaactg
gagccaaaagaagaaccaataggcacctcaaataagaggaaattccaaaatgctggtaaa
gagcagcagaaggaaacaaaaaatgcaaagaggaggagagcgggggcttcagatagagaa
gcggaggataagcttgatatgctcatacaaaagtaccgcaatactttctcacagcgaagt
tccgataaatctaaagatgctgcgagttctggaagtagagaagttagaagatggtttgaa
tcatag
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