Asparagus officinalis (garden asparagus): 109848003
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Entry
109848003 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109848003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aof04040
]
109848003
Ion channels [BR:
aof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109848003
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Gene cluster
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
109848003
NCBI-ProteinID:
XP_020272844
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Position
7:complement(151145051..151148926)
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AA seq
623 aa
AA seq
DB search
MSLLRKPSATARRGPEDTVGPRTERPDACQERGPQAWNRAILLTCAAAAVVDPLFLYIAV
SISRAHDSCLFVDGXTVTVLRCMIDALHVWNAWTKLRNIVTGRHSEDAEEPRGYKFTKSC
KGLLLDLFVILPVMQVILWVAAPGLIREGSTTAVMAVFLIMFLFQYLPKIYHSVRFLRRM
QNFSGYIFGTIWWGIALNLIAYFVXXXXXXAVGACWYLLGIQRAAKCLKEQCTLAKGCAA
TTTACVQPIYYGATTKITDAGRVSWAQDVLARRTCLDSSDNFQYGAYKWTVTLVTNTSRL
EKILLPIFWGLMTLSTFGNLESTTEWLEIVFNIITITGGLILVTMLIGNIKVFLNATTSK
KQSLHLRMRSMDWWMKKKHLPQRFRQRVRQYERQRWARGVDECEMVRNLPEGLRRDIKYH
LCLDLVRQVPLFQHMDELVLENICDRVKSLIFPKGEIITREGDPVQRMLFVVRGHLQSSQ
DLRDGVKSYCMLGPGNFSGDELLSWCXERLPPSSSTLITLETTEAFGLEASDVKYVTQHF
RYTFVNEKVRRSARYYSPGWRTWAAVAIQLAWRRYRRRKTLTSLSFIRPRRPLSRCSSLG
EEKLRLYTALLTSPKPDVDEFLL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccttcgcaaaccctccgccaccgcccgacgaggacctgaggacacggtaggg
ccgcgcaccgaacggcccgacgcgtgtcaagagcgtgggccccaggcatggaaccgggct
attctgctgacgtgcgcggcggcggccgtagtcgacccgcttttcctctacatcgccgtg
tccataagcagagcccatgactcgtgcctgttcgtcgacggtnngacggtgacagtgctg
cggtgcatgatcgacgcgctgcacgtgtggaacgcgtggacaaagttgaggaatatcgtc
accgggaggcactcggaggatgcggaggagccaaggggttacaaattcacaaagtcttgc
aagggcttgcttctcgatttatttgtcatattaccagtcatgcaggtgatactgtgggta
gcggcaccgggtctgataagggaggggtcgacgacagcagtgatggcggtgttcttaata
atgtttctgtttcagtacctgccgaagatctaccactccgtccgcttcctgcgtcgcatg
caaaacttctccggttacatatttgggaccatttggtgggggatcgccctcaacttgatc
gcctattttgtggnnnnnnnnnnnnnnnncgcggttggagcctgctggtacttgctgggt
attcagagggcggcaaagtgcctgaaagagcagtgcacgctagcaaaaggatgcgctgca
acaaccacagcgtgcgtgcagccgatttattacggcgcaacgacgaagataacagatgca
gggagagtgagttgggctcaagatgtgcttgcaaggagaacatgcctggatagcagtgac
aacttccagtatggagcatataagtggacagtcactcttgttaccaacaccagcaggttg
gagaagatactgttgcccatcttttggggcttaatgacccttagcacttttggaaacctt
gagagcaccacagaatggctggagattgtgttcaacatcatcaccataacagggggactc
atattggttactatgctcatcggaaacatcaaggtatttctgaacgcgacaacatcgaag
aagcagtcgttacatctaaggatgcggagcatggactggtggatgaagaagaagcatctg
cctcagagattcaggcagagggttcgtcagtacgagcggcagcgatgggcaagaggagtg
gatgaatgtgagatggttcgaaatctaccagagggcttaaggagggatatcaagtaccat
ctttgtctggacctcgttagacaggttcctctgttccagcacatggatgagctagtccta
gagaacatatgtgaccgagtcaagtccctcatctttcccaaaggagaaataataacaaga
gaaggtgatccggtgcaaaggatgctatttgtagtaagaggacacttacaaagcagccaa
gacctccgtgacggcgtcaagagttactgcatgctcggccctggcaacttcagcggggac
gagctcctctcctggtgcnccgagcgcctgcctccatcttcatccaccttaatcaccctt
gagacaaccgaggcattcgggctcgaggccagcgacgtaaagtacgtgacgcaacacttc
cgatacactttcgtgaacgagaaggtgaggcggagcgctcggtactactctcccgggtgg
aggacttgggctgcggtggctatacagctggcgtggagacggtataggcgtcggaagacg
cttacttcgctttcttttatacggcctcggaggccgctctcgaggtgctcttcgcttggg
gaggagaagctcaggctttacaccgcgctcctgacgtcgcccaagcctgacgttgatgag
ttcttattgtaa
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