Asparagus officinalis (garden asparagus): 109848026
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Entry
109848026 CDS
T05243
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109848026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109848026
03036 Chromosome and associated proteins [BR:
aof03036
]
109848026
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
109848026
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
109848026
RSF complex
109848026
WICH complex
109848026
B-WICH complex
109848026
NORC complex
109848026
BRF complex
109848026
NuRF complex (fruit fly)
109848026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
109848026
NCBI-ProteinID:
XP_020272875
LinkDB
All DBs
Position
7:complement(50580555..50600160)
Genome browser
AA seq
1082 aa
AA seq
DB search
MAKPLESDDLSEEIPSSDSTESDDDDQKSEEEVEDEEELEVVARPASPDEDDESQSTEDD
EGFNEGKSDDDDDDNEAEGTLKASEIGKRERARLRELERLKKQKIQEILDAQNAAIDADM
NTKGKGRLQYLLQQTEIFAHFAKGAQSATEKKTRGRGRHSSKLTEEEEDEECLKEEEGGL
SGAGGTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGY
LHEFRGITGPHMVVAPKSTLGNWMKEIRRFCPVLRTVKLLGNQDERKHIREDLLVAGKFD
VCVTSFEMAIKEKTALRRFSWRYVIIDEAHRIKNENSLLSKTMRLYHANYRLLITGTPLQ
NNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVE
KGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLF
QGAEPGPPYTTGEHLITNAGKMVLLDKLLRKLKQRGSRVLIFSQMTRLLDILEDYLMFRA
YQYCRIDGNTGGEERDASIDAFNQPGSSKFIFLLSTRAGGLGINLATADIVILYDSDWNP
QVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTV
NKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAALDAKMKKFTEDAIKFKMD
DNADLYDFDDKKDDDKVDFKKLVSENWTEPSKRERRRNYSDTDYFKQALRQGAPTKPREP
RIPRMPQLHDFQFFNVQRLNNLYEKEVRYHLAAHQKNQLRDTITEDDESDDIIGDPLTAE
EQEEKEQLLEEGFSTWTRKDFNTFVRACEKYGRNDIRSIASEMEGKTEEEVERYAKVFKE
RYRELNDYDRIIKIIERGEARISRKDEIMKAVGKKLDRYKNPWLELKIQYGQNKGKLYNE
ECDRFMLCMMHKLGYGNWDELKLAFRQSPLFRFDWFVKSRTAQELARRCDTLIRLVEKEN
QEYDEREKQARKDKKIAKNLTPSKLFMPKSPAVETTGLGSSRKRKQLIIDDYGSLGSEKI
VF
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacccttggaatccgatgatctctccgaggagatcccttccagcgactctacg
gagtctgacgacgacgatcagaagagcgaggaggaggtggaggacgaggaggagctcgaa
gttgtggcgagaccggcgagtcctgatgaagacgatgagtctcagtcgacggaggacgat
gaggggtttaacgaggggaagagtgatgacgatgatgatgataatgaggctgaggggaca
cttaaggcttcagaaattggaaagcgtgagagagctcgacttagagagctggagaggctg
aagaagcaaaagattcaagaaatactcgatgcacaaaatgctgctattgacgctgacatg
aacaccaaagggaaggggcgtttgcagtatctactacagcagactgagatatttgctcat
tttgcaaagggtgcccaatctgcaacagagaagaagacacgaggaagagggcgacattca
tccaagttaaccgaggaggaagaagatgaagaatgtcttaaggaggaagagggtggtctt
tctggtgcgggaggaacacgtttagtaacacagccatcttgtatacaagggaaaatgagg
gattaccaactagctgggctgaattggctaattcggttatatgaaaatggaattaatggg
attttagctgatgaaatgggtcttgggaaaacgttgcaaaccatctctctgttgggctat
ttacatgaattcagaggaattacagggcctcacatggtggtggcaccaaaatccactctt
ggcaactggatgaaggaaattcgacgattctgtcccgtgctgcgtactgtaaagcttttg
ggaaatcaagatgaaaggaaacatatacgcgaagacttactggttgctgggaagtttgat
gtatgtgttacaagttttgaaatggccatcaaagagaaaactgctttgagacgcttcagt
tggcgctatgttattattgatgaggcacatcggataaagaatgagaattctcttctgtcg
aagacaatgagactttatcatgccaattatcgccttcttattacgggcaccccacttcag
aacaatcttcatgagctgtggtctcttcttaacttcctgcttccggagatatttagttca
gctgaaacatttgatgagtggtttcaaatatcaggagaaaatgatcagcaggaggttgtt
caacagcttcacaaggttcttcgtccatttctcctacggaggcttaaatcggatgttgag
aaaggtttgcctcctaaaaaggaaactatacttaaagtagggatgtcccagatgcagaag
cagtattatcgtgctctccttcagaaagatttagaggttgtaaatgctggtggagaacgc
aaacgtctgctaaacatagcgatgcaactgcgcaaatgttgtaatcatccatatttgttc
caaggtgcagaacctggcccgccttatacaacaggagagcatcttattacaaatgcagga
aaaatggtccttctggataaattactgcggaaactaaaacaacgaggctccagagtgttg
atattttcacagatgactagacttctggacatccttgaagattatttaatgttccgtgca
taccagtactgtcgtatagatggaaatactggtggagaagaacgtgatgcttcaattgat
gccttcaatcaacctggaagttcaaagtttatcttcttgctttcaacaagagcaggcggc
ctggggattaaccttgccaccgcagatatagttatcctttatgacagtgactggaaccct
caagttgatttacaagctcaagatcgggcgcataggattggtcaaaagaaagaagttcaa
gtgttccgtttttgcacagagtacactattgaagaaaaagtgattgagagagcatataag
aaacttgcacttgatgctttggtgattcaacaagggcgcctagccgagcagaaaactgtg
aataaagatgagctgttgcagatggtgaggtttggtgctgaaatggtttttagctccaag
gacagtacaataacagatgaagatattgaccgaattatagcaaaaggagaagaggcaaca
gcagcccttgatgctaaaatgaaaaagttcacagaagatgccatcaagtttaagatggat
gacaatgctgatttgtacgattttgatgataagaaggatgatgataaagttgactttaaa
aaacttgttagtgagaactggacagaaccatccaagagggaacgtagacgcaattattct
gacactgattacttcaaacaagcattaaggcaaggtgctccgacaaaaccaagagagcca
cggattccccgaatgccgcagctgcatgactttcagttttttaacgtccaaagattgaac
aatttatatgaaaaagaagtacggtatcatcttgcggcacaccaaaagaatcagttaagg
gacacaattaccgaagatgatgaatctgatgacataataggggatccattgactgctgaa
gaacaagaagaaaaggaacaacttttggaagagggtttctcaacatggacaaggaaagac
tttaatacatttgttcgagcttgtgagaagtatgggcgtaatgatataagaagcatagct
tcggaaatggagggaaaaacagaagaagaggttgaaagatacgccaaagtctttaaggag
agatacagagaattaaatgactatgatcggataataaaaatcatagaaagaggagaggct
aggatttcaaggaaagatgagataatgaaagctgttggcaaaaagttggatcgttacaag
aatccatggttagaattgaagattcagtatggtcaaaacaaaggaaaattgtataatgaa
gaatgtgaccggttcatgttatgcatgatgcacaaacttggatacggaaactgggatgag
ctgaaattagcttttcgccaatcacccttatttcgttttgattggtttgtgaagtcgcgc
acggctcaagagcttgccagacgctgcgatactttaattcgtttggtggagaaagaaaac
caagaatatgatgagcgggagaaacaggctcgaaaagacaagaagattgcaaagaatttg
acaccgagtaagctcttcatgcctaaatcaccagctgtggagaccactggtttgggttct
tcaaggaagcggaagcagctcatcattgacgattatggaagcctcgggtcggagaagata
gttttttga
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integrated database retrieval system
