Asparagus officinalis (garden asparagus): 109848030
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Entry
109848030 CDS
T05243
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109848030
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
General mRNP proteins
109848030
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
109848030
NCBI-ProteinID:
XP_020272878
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All DBs
Position
7:complement(89361237..89378500)
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AA seq
407 aa
AA seq
DB search
MQYLPRRYKDKKEEVAEPEADPERDQRTVFAYQINLKADERDVYEFFSRAGKVRDVRLIM
DRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLRGQAVMVKPSEAEKNLVQSTTGAGAGGG
GGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPLDETGHCKGFGFVQFARLE
DARNAQNLNGQLEIAGRVIKVSAVTDQVGVQEVGTNAADLDDDEGGGMSLNAHSRALLMQ
KLDRSGSATSVAGVLVNPAVTTPALAVPTASVLGAPPVVSPLIQPTIPALAGLQASAMPI
ASITTTVDTIGFPSECLLLKNMFDPAVETEPDFDLDIKEDVQEECQKFGKVKHIFVDKYS
AGHVYLRFESTNSAMEAQRALHGRWFAGKMITATFMLPQSYEAKFST
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacctaccaaggcgttataaagacaagaaagaggaggttgctgagcctgaggct
gatcctgagagggaccagcgcacagtatttgcttatcagatcaatttaaaggctgatgaa
agagacgtatatgagtttttctcaagggctggaaaggtacgggatgttcgtcttataatg
gatcgaaattcaagacgttctaagggagtgggatatatagagttctatgatgcaatgtct
gtcccaatggcaattgctctatctggtcaacctcttcgtggccaagctgtaatggttaag
ccatcagaggcagagaagaatttggtgcaatctaccactggagcgggagcaggtggaggt
ggtggaccatattctggtggagccagaagattatatgttggcaatcttcatttcaacatt
acagaagatcaactccgacaggtctttgagccgtttggtactgttgagctagttcagcta
cccctggacgaaactggacattgcaaaggttttggttttgttcaatttgcacgccttgaa
gatgcgagaaatgctcaaaatttaaatggccagttagaaattgctggcagggtgataaag
gtttctgctgtgacggatcaagttggcgtgcaggaagtcggtacaaatgctgctgatctt
gatgatgacgagggtggcggaatgtcgctaaatgcccattctagagctctccttatgcaa
aaattggaccgcagtggctctgctacaagtgtagctggtgtgcttgtcaatccagctgtt
accacccctgcccttgctgtaccaacagcttcagttcttggtgctcctcctgtggtatct
ccccttatacaaccaactatacccgcccttgcaggtcttcaagcttcagctatgccaatt
gcttctatcaccacaactgttgacaccattgggtttcctagtgaatgcttactgttgaag
aatatgtttgaccctgctgttgagactgaaccggattttgatcttgatattaaagaagac
gttcaagaggaatgtcaaaaatttggaaaagtgaagcatatctttgtggacaagtatagt
gctggccacgtatatctgcgttttgagagtacaaattcagctatggaagcacagcgtgcg
ctccatgggaggtggtttgctggaaagatgattacagcaacattcatgctgccgcagagc
tatgaagcgaagttctcaacataa
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