Asparagus officinalis (garden asparagus): 109848168
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Entry
109848168 CDS
T05243
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109848168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109848168
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109848168
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109848168
NCBI-ProteinID:
XP_020273129
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All DBs
Position
7:7208447..7220008
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AA seq
291 aa
AA seq
DB search
MRRHDDRYGGTRLYVGRLSSRTRSRDLERLFSRYGRVRDVDMKHDFAFIEFSDPRDADDA
RYSLNGRDFDGGRLLVEFAKGTPRGPGGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAG
DWKNKCYRCGERGHIERNCHNSPKSLKRGRSYSRSLSPRRGRSRSRSYSRGHSYSRSRSP
PRRGGRKRERSRSPSYSRSPKPRKMSPPSEERKRSLSPASSQSPRKQLSPSPNGVKETER
NGSEYSGSPMRKENSPSPRSSPVHRRSVSPETNGRGASPVDDEDNHDSPQD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggcatgatgaccgatatggtggcactcgcctgtatgttgggcgtttgtcatcc
cgcactcgatcacgtgaccttgaacgtcttttcagtagatatggaagagtgcgagatgtg
gacatgaagcatgactttgcattcattgaatttagtgatcctcgtgatgctgatgatgca
agatacagcttgaatgggcgggactttgatggaggtcgtctgttggtggaatttgctaag
gggactccccgtgggcctggaggttcccgggagtatctaggaaggggccctcctcctgga
tctggtcgatgctttaactgtgggcttgatggtcactgggcaagagattgcaaggctggc
gactggaaaaacaagtgttaccgctgtggagaaagaggccatatagaaagaaattgccat
aacagtcctaaaagtctcaagcgtggacggagttactcaaggtcactttctcctcggcgt
ggtaggagccgcagtcgaagttatagccgtggtcacagttacagtcgatccagatctcct
ccaaggagaggtgggcgtaaacgtgagagatcaaggagccctagctacagcaggagccca
aagccaaggaagatgtctccaccttctgaagagcggaagcgaagcctctctcctgccagt
agccagagcccacgaaagcagctgagcccttcgccaaatggagtcaaagaaactgagcgc
aatggatcagaatacagtggaagccctatgaggaaggagaatagcccgagtcctagaagc
tcgcccgtgcacaggaggtctgtgagcccggagactaatggaagaggcgccagccccgtg
gatgatgaagacaaccatgattctccacaagactga
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