Asparagus officinalis (garden asparagus): 109848208
Help
Entry
109848208 CDS
T05243
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109848208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109848208
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109848208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109848208
NCBI-ProteinID:
XP_020273179
LinkDB
All DBs
Position
7:96300055..96332182
Genome browser
AA seq
249 aa
AA seq
DB search
MSNGACGAPFTSRVTLVDILFQLVMSGRVNCMIYVGNLPLDIRESEVEDLFYKYGRIVDI
ELKNPPRPPGYCFVEFESARDADDAVRGRDGYNFDGYRLRVELAHGGRGHSSSFGRGSSY
GSGGGRKYGISRRSEYRVVVHGLPPTASWQDLKDHMRKAGDVCFAQVFRDGDGSMGLVDY
TNYEDMRYAIRKLDDTEFKNPFARSYIRVKMYEGSPPRSRSRSYSRSRSPRRNLSDRSTL
SRSRSVSPA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatggagcttgtggagcaccattcacatcaagggttaccctcgtggatatactc
tttcagctagtcatgagcggtcgtgtaaactgtatgatatatgtaggaaaccttcctcta
gatatacgtgaatcggaagtggaagatctgttttacaagtatggtcgcatagtagacatt
gaattgaagaatccacctcgcccccctggttattgttttgtggagtttgaaagtgctcga
gatgctgatgatgctgtcaggggtcgtgatggctataactttgatggataccgtttgagg
gttgagctggctcatggaggcaggggacattcatcttcatttggacggggtagcagttat
ggaagtggcggaggcagaaaatatggaatttcccgccgttcggaatatcgagttgttgtt
catggactaccacctacagcttcatggcaagatctaaaggatcatatgagaaaggctggg
gatgtttgctttgctcaagttttccgtgatggggatggaagcatgggtttggttgactac
accaactacgaggacatgagatacgccattcggaaacttgatgacactgaattcaaaaac
ccctttgcaaggtcttatattcgggttaagatgtatgagggaagtccacctcgtagccgg
agcaggagttacagcagaagtagaagtcccagacggaacctaagtgataggtctactttg
tcaaggtctaggtctgtctctcctgcctga
DBGET
integrated database retrieval system
