Asparagus officinalis (garden asparagus): 109848296
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Entry
109848296 CDS
T05243
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109848296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109848296
03036 Chromosome and associated proteins [BR:
aof03036
]
109848296
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109848296
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109848296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
109848296
NCBI-ProteinID:
XP_020273317
LinkDB
All DBs
Position
7:complement(30319021..30322548)
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AA seq
725 aa
AA seq
DB search
MSVYKDKSHEELRWEDYQRGDKGGPNYAGQFGAAVNFPSSEKANPFRLTSSNSSYNQTSP
SSSIAQDSVNPSFNRTNTFSTPGLSSFISSSSQKTTFSSFAQNTANPSFNFTTTFATPGL
TCANPFPQTSSNSLSNQTPAFSQFTQNNANPSFNHTPTFTTSGLNRANPSAETSINSSSN
QTPTFSQFQQNSANTSFNFKPTFSTSGQTGANPSAHTSSNSSFNETFSFPFSKEANPGGQ
TSTNPFATDFISSSNSVSCLPFSMLPSSFSSTSSTLNGVSTISSPFDTSSTPSIMQTTSP
IFLYFIVPQSPQFTTPPSSFSSISSTSIATSTPFTTSLQFPMASQWNSGQTNPSTLPASQ
VASAAQTSSYVIPTHPASSTSNCEFKAPQGLFAQLPNTKCNMVTEPVSTANPWGTLPAPP
RIFSGQRGSEHVQYGISSMPVAEKSTPTKTSSLSALRHLSQRRISLPLRKYNAKVDGPKA
SFFMEDEGQQTSSGVDIFFKPREKPRSFVIRQSEQWPSRASIESQSIPTNENESPAGNTC
MREKKQNLITNGHFHKLTDSSYINFKVYEHCDDIDTLMPKLPNTEYYTEPRIPELAAKER
QEPGFCCHVKDFVIGRHGYGSIKFKGETDVRYLDLESIVQFNDREVIVYKDENMKPPVGE
GLNKPAEVTLLNIKCVDKKTGACYTEGIKVEKFKEKLMKKTEEQKAEFVSFNAVKGFWKF
RVKHF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtacaaagataaaagtcatgaggaacttagatgggaggattatcaacgcgga
gataaaggaggcccaaattatgctggacaatttggagctgccgttaattttccctcgtca
gagaaagctaatccttttcgactgaccagttcaaattcatcttacaaccaaacatctcca
tcttcatcaattgcacaagacagtgtgaatccatctttcaaccgcacaaatactttctcg
actccaggactgagcagttttatttcatcttccagccaaaaaactacattctcatcattt
gcacagaacactgcgaatccgtctttcaacttcacaactactttcgcaactccagggctg
acctgtgctaatccttttccacaaaccagttctaattcattgtccaaccaaacccctgct
ttctcgcaattcacacagaacaatgcgaatccatctttcaatcacacacctacattcaca
acttcaggactgaacagagctaatccttctgcagaaaccagtattaattcatcgtccaac
caaacccctactttctctcaatttcaacagaacagtgctaatacatctttcaatttcaaa
cctacattctcaacttcaggacaaaccggggctaatccttctgcacataccagttctaat
tcatcgttcaatgaaaccttcagttttcctttctcaaaggaagcaaatcctggtggccag
accagcactaacccattcgctactgactttatttcctcgagcaattcagtttcctgctta
ccattctctatgctgcctagctcttttagttcgacctcttccactttgaatggggtttca
accatctcctcgccattcgatacatcttcaactccatctattatgcagacaacatctcca
atttttctgtatttcatagtacctcaaagcccacagttcactacaccaccgagctctttt
agctcaatctcttcaacttcgatcgccacctccacaccattcactacatctttacaattt
cctatggccagtcaatggaattctggtcaaacaaatccttcgactttgcctgcttctcaa
gtggctagcgctgctcagacatcaagttacgtaattccgacacacccagcatcttccacg
tccaactgtgagttcaaagctcctcagggtctctttgcacaactaccgaacactaagtgc
aacatggtcactgaaccagtgtctacagctaatccttggggaacattgccagcaccacct
cggatcttttctggtcaaagaggctctgaacatgttcaatatgggatttctagcatgcct
gttgctgagaagtccacgccaaccaaaacatcgagcttatcagctcttagacacttgtct
caaagaaggattagtttgcctctgaggaaatataatgctaaagttgatggtccaaaggca
tcattcttcatggaggatgaaggacaacagacatcatcaggggttgatatatttttcaaa
ccaagggagaagccaagatcattcgttattcgccaaagtgaacagtggccctcaagagct
agcattgagagccagtctattccaactaatgaaaatgaaagcccagcaggaaacacctgt
atgagagagaagaagcagaatttaatcaccaatggccattttcataaactaaccgattca
tcatacatcaattttaaagtctatgagcactgtgatgatattgatactctgatgcccaaa
cttccaaacactgagtactacaccgagccaagaatccctgagctagctgctaaggagaga
caagagccaggattctgttgccatgtgaaggactttgtaattggacggcatggatatgga
agtatcaagttcaaaggcgagactgatgtcagatatctcgatcttgagtccattgtccag
ttcaatgaccgagaggtgattgtgtacaaagacgagaacatgaaacctccggttggagag
ggactcaacaagccagcggaggtgacgcttcttaatatcaagtgtgttgacaagaagaca
ggagcgtgttatactgaggggatcaaggtggagaagtttaaggagaagttgatgaagaag
actgaggagcagaaggctgagtttgtttcatttaatgctgttaaagggttttggaagttt
agggttaagcacttctaa
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